CACNA1A Gene Summary [Human]

Voltage-dependent calcium channels mediate the entry of calcium ions into excitable cells, and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, and gene expression. Calcium channels are multisubunit complexes composed of alpha-1, beta, alpha-2/delta, and gamma subunits. The channel activity is directed by the pore-forming alpha-1 subunit, whereas, the others act as auxiliary subunits regulating this activity. The distinctive properties of the calcium channel types are related primarily to the expression of a variety of alpha-1 isoforms, alpha-1A, B, C, D, E, and S. This gene encodes the alpha-1A subunit, which is predominantly expressed in neuronal tissue. Mutations in this gene are associated with 2 neurologic disorders, familial hemiplegic migraine and episodic ataxia 2. This gene also exhibits polymorphic variation due to (CAG)n-repeats. Multiple transcript variants encoding different isoforms have been found for this gene. In one set of transcript variants, the (CAG)n-repeats occur in the 3' UTR, and are not associated with any disease. But in another set of variants, an insertion extends the coding region to include the (CAG)n-repeats which encode a polyglutamine tract. Expansion of the (CAG)n-repeats from the normal 4-18 to 21-33 in the coding region is associated with spinocerebellar ataxia 6. [provided by RefSeq, Jul 2016]

Details

Type
Protein Coding
Official Symbol
CACNA1A
Official Name
calcium voltage-gated channel subunit alpha1 A [Source:HGNC Symbol;Acc:HGNC:1388]
Ensembl ID
ENSG00000141837
Bio databases IDs NCBI: 773 Ensembl: ENSG00000141837
Aliases calcium voltage-gated channel subunit alpha1 A
Synonyms Alpha1 2.1, alpha1A, APCA, BccA1, BI, Caca1a, Cach4, CACN3, CACNA1A RBA, CACNL1A4, calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, calcium channel, voltage-dependent, P/Q type, α 1A subunit, calcium voltage-gated channel subunit alpha1 A, CAV2.1, Ccha1a, DEE42, EA2, EIEE42, FHM, HPCA, la, LOC688360, MHP, MHP1, nmf352, rbA-1, rkr, SCA6, smrl, tg, Vdcc α 1a, α-1a calcium channel subunit
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CACNA1A often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Voltage-dependent L-type calcium channel, IQ-associated
  • intracellular loop
  • Ion transport protein
  • calmodulin binding
  • high voltage-gated calcium channel
  • Proline-rich protein
  • protein binding
  • ion channel
  • syntaxin binding
  • voltage-gated calcium channel
  • Voltage gated calcium channel IQ domain
  • ankyrin binding domain
  • calretinin binding domain
  • cytoplasmic domain
  • IQ-like motif
  • polyglutamine repeat
  • intracellular linker
  • Polycystin cation channel
  • DII/III loop domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • endometriosis
  • cancer
  • HIV infection
  • obesity
  • episodic ataxia type 2
  • chronic postoperative pain
  • familial hemiplegic migraine type 1 with progressive cerebellar ataxia
  • early infantile epileptic encephalopathy 42
  • diabetes mellitus
  • childhood epilepsy
regulated by
regulates
role in cell
  • cell death
  • depolarization
  • expression in
  • apoptosis
  • formation
  • loss
  • quantity
  • transmembrane potential
  • binding
  • degeneration

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • Cytoplasm
  • cell surface
  • postsynaptic region
  • cellular membrane
  • Nucleus
  • apical cell surfaces
  • intramembrane particles
  • presynaptic membrane
  • postsynaptic membrane
  • synaptic vesicles
  • neuromuscular junctions
  • nerve ending
  • synaptosomes
  • cellular protrusions
  • perikaryon
  • dendrites
  • axon terminals

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CACNA1A gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • calcium ion transmembrane transport
  • regulation of synaptic transmission
  • synaptic transmission
  • elevation of cytosolic calcium ion concentration

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • membrane
  • voltage-gated calcium channel complex
  • neuronal cell body
  • synapse
  • cell projection
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • high voltage-gated calcium channel activity
  • syntaxin binding
  • metal ion binding
  • voltage-gated calcium channel activity
  • beta-amyloid binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.