BEST1 Gene Summary [Human]

This gene encodes a member of the bestrophin gene family. This small gene family is characterized by proteins with a highly conserved N-terminus with four to six transmembrane domains. Bestrophins may form chloride ion channels or may regulate voltage-gated L-type calcium-ion channels. Bestrophins are generally believed to form calcium-activated chloride-ion channels in epithelial cells but they have also been shown to be highly permeable to bicarbonate ion transport in retinal tissue. Mutations in this gene are responsible for juvenile-onset vitelliform macular dystrophy (VMD2), also known as Best macular dystrophy, in addition to adult-onset vitelliform macular dystrophy (AVMD) and other retinopathies. Alternative splicing results in multiple variants encoding distinct isoforms.[provided by RefSeq, Nov 2008]

Details

Type
Protein Coding
Official Symbol
BEST1
Official Name
bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703]
Ensembl ID
ENSG00000167995
Bio databases IDs NCBI: 7439 Ensembl: ENSG00000167995
Aliases bestrophin 1, Best disease
Synonyms ARB, BEST, Best1V1Delta2, BEST2, BESTROPHIN, bestrophin 1, BMD, LOC100504840, mBest1, RP50, TU15B, VMD2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human BEST1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • channel/pore class transporter
  • chloride channel
  • intracellular calcium activated chloride channel
  • protein binding
  • Bestrophin, RFP-TM, chloride channel
  • identical protein binding
  • ion channel
  • bicarbonate transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • juvenile onset vitelliform macular dystrophy
  • retinal dystrophy
  • multifocal Best vitelliform macular dystrophy
  • organismal death
  • retinitis pigmentosa
  • autosomal recessive bestrophinopathy
  • autosomal dominant vitreoretinochoroidopathy
  • retinitis pigmentosa type 50
  • adult-onset vitelliform macular dystrophy
  • fundus flavimaculatus
regulated by
regulates

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cellular membrane
  • Nucleus
  • cytoplasmic particles
  • cytosol
  • microdomains
  • basolateral membrane
  • basal membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human BEST1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • glutamate secretion
  • detection of light stimulus involved in visual perception
  • ion transmembrane transport
  • regulation of synaptic plasticity
  • transepithelial chloride transport
  • regulation of calcium ion transport
  • visual perception
  • chloride transport
  • bicarbonate transport
  • protein oligomerization

Cellular Component

Where in the cell the gene product is active
  • chloride channel complex
  • basal plasma membrane
  • membrane
  • cytosol
  • basolateral plasma membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • intracellular calcium activated chloride channel activity
  • ligand-gated channel activity
  • chloride channel activity
  • bicarbonate transmembrane transporter activity

Gene-Specific Assays for Results You Can Trust

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