TNXB Gene Summary [Human]

This gene encodes a member of the tenascin family of extracellular matrix glycoproteins. The tenascins have anti-adhesive effects, as opposed to fibronectin which is adhesive. This protein is thought to function in matrix maturation during wound healing, and its deficiency has been associated with the connective tissue disorder Ehlers-Danlos syndrome. This gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6. It is one of four genes in this cluster which have been duplicated. The duplicated copy of this gene is incomplete and is a pseudogene which is transcribed but does not encode a protein. The structure of this gene is unusual in that it overlaps the CREBL1 and CYP21A2 genes at its 5' and 3' ends, respectively. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
TNXB
Official Name
tenascin XB [Source:HGNC Symbol;Acc:HGNC:11976]
Ensembl ID
ENSG00000168477
Bio databases IDs NCBI: 7148 Ensembl: ENSG00000168477
Aliases tenascin XB, Hexabrachion-like protein, tenascin-X
Synonyms EDS3, EDSCLL, EDSCLL1, Hs.534359, HXBL, LOC101060681, Tenascin-X, TENASCIN XA, Tenascin-Xb, TENX, Tn-mhc, TN-X, TNXB1, TNXB2, TNXBS, VUR8, XB, XBS
Species
Human, Homo sapiens
OrthologiesMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TNXB often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • FN3
  • extracellular matrix binding
  • integrin binding
  • Keratin, high sulfur B2 protein
  • extracellular matrix structural constituent
  • collagen binding
  • protein binding
  • Fibronectin type 3 domain
  • heparin binding
  • FReD
  • Tenascin EGF domain
  • EGF_CA

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • human immunodeficiency virus I infection
  • rheumatoid arthritis
  • COVID-19
  • cervical carcinoma
  • lung squamous cell carcinoma
  • squamous cell lung cancer
  • psoriasis
  • endometrial cancer
  • neuroticism
  • cervical cancer
regulated by
regulates
  • LOXL2
  • lipid
  • Collagen type I (complex)
  • fatty acid
  • MMP2
  • Collagen(s)
  • triacylglycerol
  • ACTA2
role in cell
  • adhesion
  • proliferation
  • density
  • expression in
  • activation
  • organization
  • abnormal morphology

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • intracellular membrane-bounded organelle
  • extracellular matrix
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TNXB gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell-matrix adhesion
  • neuron projection development
  • positive regulation of cell proliferation
  • triglyceride metabolic process
  • cell adhesion
  • fatty acid metabolic process
  • positive regulation of epithelial to mesenchymal transition
  • positive regulation of vascular endothelial growth factor signaling pathway
  • elastic fiber assembly
  • regulation of cell differentiation
  • regulation of cell adhesion
  • collagen fibril organization
  • regulation of cell migration
  • actin cytoskeleton organization
  • collagen metabolic process

Cellular Component

Where in the cell the gene product is active
  • extracellular space
  • extracellular vesicular exosome
  • intracellular membrane-bounded organelle
  • extracellular matrix
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • collagen binding
  • integrin binding
  • heparin binding
  • extracellular matrix structural constituent

Gene-Specific Assays for Results You Can Trust

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