HNRNPF Gene Summary [Human]

This gene belongs to the subfamily of ubiquitously expressed heterogeneous nuclear ribonucleoproteins (hnRNPs). The hnRNPs are RNA binding proteins that complex with heterogeneous nuclear RNA (hnRNA). These proteins are associated with pre-mRNAs in the nucleus and regulate alternative splicing, polyadenylation, and other aspects of mRNA metabolism and transport. While all of the hnRNPs are present in the nucleus, some seem to shuttle between the nucleus and the cytoplasm. The hnRNP proteins have distinct nucleic acid binding properties. The protein encoded by this gene has three repeats of quasi-RRM domains that bind to RNAs which have guanosine-rich sequences. This protein is very similar to the family member hnRPH. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
HNRNPF
Official Name
heterogeneous nuclear ribonucleoprotein F [Source:HGNC Symbol;Acc:HGNC:5039]
Ensembl ID
ENSG00000169813
Bio databases IDs NCBI: 3185 Ensembl: ENSG00000169813
Aliases heterogeneous nuclear ribonucleoprotein F
Synonyms 4833420I20Rik, heterogeneous nuclear ribonucleoprotein F, HnRNP F/H, HNRPF, mcs94-1, OK/SW-cl.23, Ribonucleoprotein F
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human HNRNPF often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA recognition motif (RRM) superfamily
  • RNA recognition motif
  • protein binding
  • single-stranded RNA binding
  • RNPHF zinc finger
  • TATA-binding protein binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • gastric cancer
  • infection by HIV-1
regulated by
role in cell
  • apoptosis
  • migration
  • growth
  • dipeptide repeat protein sensitivity
  • invasion by
  • cell cycle progression
  • binding in
  • processing in
  • adipogenesis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • catalytic step 2 spliceosome
  • Cytoplasm
  • Plasma Membrane
  • cytosol
  • nuclear pores
  • nucleoplasm
  • interchromatin granule clusters
  • synapse
  • detergent-soluble fraction
  • paraspeckle-like structures

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human HNRNPF gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of RNA splicing
  • RNA processing
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • catalytic step 2 spliceosome
  • membrane
  • cytosol
  • synapse
  • plasma membrane
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • RNA binding
  • single-stranded RNA binding

Gene-Specific Assays for Results You Can Trust

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