POMK Gene Summary [Human]

This gene encodes a protein that may be involved in the presentation of the laminin-binding O-linked carbohydrate chain of alpha-dystroglycan (a-DG), which forms transmembrane linkages between the extracellular matrix and the exoskeleton. Some pathogens use this O-linked carbohydrate unit for host entry. Loss of function compound heterozygous mutations in this gene were found in a human patient affected by the Walker-Warburg syndrome (WWS) phenotype. Mice lacking this gene contain misplaced neurons (heterotopia) in some regions of the brain, possibly from defects in neuronal migration. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2013]

Details

Type
Protein Coding
Official Symbol
POMK
Official Name
protein O-mannose kinase [Source:HGNC Symbol;Acc:HGNC:26267]
Ensembl ID
ENSG00000185900
Bio databases IDs NCBI: 84197 Ensembl: ENSG00000185900
Aliases protein O-mannose kinase
Synonyms 4930444A02Rik, FLJ23356, MDDGA12, MDDGC12, protein-O-mannose kinase, RGD1310810, SGK196
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human POMK often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • kinase
  • carbohydrate kinase
  • protein kinase
  • Protein Kinases, catalytic domain
  • alcohol group acceptor phosphotransferase
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A12
  • muscular dystrophy-dystroglycanopathy limb-girdle type C12
regulated by
regulates
  • carbohydrate

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • endoplasmic reticulum membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human POMK gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein O-linked glycosylation
  • neuromuscular process
  • sensory perception of pain
  • brain development
  • carbohydrate phosphorylation
  • learning or memory

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane

Molecular Function

What the gene product does at the molecular level
  • ATP binding
  • protein binding
  • carbohydrate kinase activity
  • protein kinase activity
  • phosphotransferase activity, alcohol group as acceptor

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.