COL4A5 Gene Summary [Human]

This gene encodes one of the six subunits of type IV collagen, the major structural component of basement membranes. Mutations in this gene are associated with X-linked Alport syndrome, also known as hereditary nephritis. Like the other members of the type IV collagen gene family, this gene is organized in a head-to-head conformation with another type IV collagen gene so that each gene pair shares a common promoter. Alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, Aug 2010]

Details

Type
Processed Transcript
Official Symbol
COL4A5
Official Name
collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
Ensembl ID
ENSG00000188153
Bio databases IDs NCBI: 1287 Ensembl: ENSG00000188153
Aliases collagen type IV alpha 5 chain
Synonyms ASLN, ATS, ATS1, CA54, Collagen iv alpha5, collagen type IV alpha 4, collagen type IV alpha 5, collagen, type IV, alpha 5, collagen type IV alpha 5 chain, COLLAGEN type IV, ISOTYPE 4, COLLAGEN type IV, ISOTYPE 5, collagen type IV α 4, collagen type IV α 5, collagen, type IV, α 5, collagen type IV α 5 chain, Procollagen iv alpha5, RGD1565499
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL4A5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Collagen triple helix repeat (20 copies)
  • C-terminal tandem repeated domain in type 4 procollagen
  • protein binding

Pathways

Biological processes and signaling networks where the COL4A5 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • type I Alport syndrome
  • Alport syndrome
  • Dupuytren contracture
  • diabetic foot ulcer disorder
  • kidney disease
  • X-linked Alport syndrome
  • nephrosis
  • aortic valve calcification
  • cholesteatoma
  • rheumatoid arthritis
regulated by
  • dexamethasone
  • tetrachlorodibenzodioxin
  • EGF
  • D-glucose
  • TRIM38
  • ERG
  • FGF16
  • estrogen receptor
  • beta-estradiol
  • insulin
role in cell
  • development
  • assembly

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • endoplasmic reticulum lumen
  • neuromuscular junctions
  • basement membrane
  • glomerular basement membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL4A5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • neuromuscular junction development
  • extracellular matrix organization
  • collagen-activated tyrosine kinase receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • basement membrane
  • neuromuscular junction
  • extracellular region
  • collagen type IV

Molecular Function

What the gene product does at the molecular level
  • extracellular matrix structural constituent conferring tensile strength

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.