TRIM38 Gene Summary [Human]
This gene encodes a member of the tripartite motif (TRIM) family. The encoded protein contains a RING-type zinc finger, B box-type zinc finger and SPRY domain. The function of this protein has not been identified. A pseudogene of this gene is located on the long arm of chromosome 4. [provided by RefSeq, Jul 2012]
Details
| Type | Protein Coding |
| Official Symbol | TRIM38 |
| Official Name | tripartite motif containing 38 [Source:HGNC Symbol;Acc:HGNC:10059] |
| Ensembl ID | ENSG00000112343 |
| Bio databases IDs | |
| Aliases | tripartite motif containing 38 |
| Synonyms | Gm23, RNF15, RORET, tripartite motif-containing 38 |
| Species | Human, Homo sapiens |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TRIM38 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- coiled-coil (CC) domain of Drosophila brain tumor (brat) and similar proteins
- transcription co-activator
- B-Box C-terminal domain
- SPRY domain
- ubiquitin protein ligase activity
- zinc finger of C3HC4-type, RING
- enzyme
- protein binding
- associated with SPRY domains
- B-box-type zinc finger superfamily
- RING-type zinc-finger
- RING finger (Really Interesting New Gene) domain and U-box domain superfamily
- Modified RING finger domain
- Ring finger
- B-box zinc finger
- SPRY-associated domain
- Zinc finger, C3HC4 type (RING finger)
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
- ocular hypertension
- peripheral T-cell lymphoma
- T-cell non-Hodgkin disease
- mature T-cell neoplasia
- nonalcoholic fatty liver disease
- hepatic steatosis
- hepatitis
- lung cancer
- non-small cell lung cancer
- inguinal hernia
role in cell
- replication in
- production in
- expression in
- activation in
- signaling in
- degradation in
- K48 polyubiquitination in
- transcription in
- transactivation in
- accumulation in
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Cytoplasm
- granules
- cytosol
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the human TRIM38 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- protein K48-linked ubiquitination
- regulation of protein localization
- protein sumoylation
- protein polyubiquitination
- positive regulation of I-kappaB kinase/NF-kappaB cascade
- positive regulation of viral entry into host cell
- positive regulation of sequence-specific DNA binding transcription factor activity
- positive regulation of NF-kappaB transcription factor activity
- positive regulation of autophagy
- proteasomal ubiquitin-dependent protein catabolic process
- regulation of interferon-beta production
- regulation of viral entry into host cell
- positive regulation of transcription, DNA-dependent
- innate immune response
- positive regulation of viral genome replication
- negative regulation of defense response to virus
Cellular Component
Where in the cell the gene product is active
- cytoplasm
- cytosol
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- protein kinase binding
- zinc ion binding
- protein binding
- protein homodimerization activity
- transcription coactivator activity