Nelfb Gene Summary [Mouse]

This gene encodes subunit B of a metazoan-specific, four-subunit protein complex that regulates promoter-proximal pausing of RNA polymerase II. RNA polymerase II pausing is thought to be important for coordination of gene transcription during embryonic development and stress responses. Consistently, disruption of this gene in mouse causes inner cell mass deficiency and embryonic lethality. In addition, this gene is required for maintenance of mouse embryonic stem cells by preventing expression of developmental genes. In adult mice, conditional deletion of this gene results in cardiomyopathy and impaired response to cardiac stress. Multiple protein isoforms are encoded through the use of a non-AUG (CUG) initiation codon and an alternative downstream AUG initiation codon. In addition, alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2015]

Details

Type
Protein Coding
Official Symbol
Nelfb
Official Name
negative elongation factor complex member B [Source:MGI Symbol;Acc:MGI:1931035]
Ensembl ID
ENSMUSG00000013465
Bio databases IDs NCBI: 58202 Ensembl: ENSMUSG00000013465
Aliases negative elongation factor complex member B
Synonyms A730008L03RIK, COBRA1, negative elongation factor complex member B, RGD1307832
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Nelfb often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Cofactor of BRCA1 (COBRA1)
  • protein binding

Pathways

Biological processes and signaling networks where the Nelfb gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplasia
regulated by
  • beta-estradiol
  • TP53
  • PD184352
  • KLF3
  • THP-1 cells
  • BRCA1
regulates
role in cell
  • expression in
  • apoptosis
  • proliferation
  • differentiation
  • cell cycle progression
  • G0/S phase transition
  • JQ1-sensitivity
  • decondensation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • cytosol
  • mitochondrial outer membrane
  • nucleoplasm
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Nelfb gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell proliferation
  • negative regulation of transcription elongation from RNA polymerase II promoter
  • stem cell differentiation
  • negative regulation of stem cell differentiation

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • NELF complex
  • cytoplasm
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding

Gene-Specific Assays for Results You Can Trust

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