Cry1 Gene Summary [Mouse]

This gene encodes a flavin adenine dinucleotide-binding protein that is a key component of the circadian core oscillator complex, which regulates the circadian clock. This gene is upregulated by Clock/Arntl heterodimers but then represses this upregulation in a feedback loop using Per/Cry heterodimers to interact with Clock/Arntl. Polymorphisms in this gene have been associated with altered sleep patterns. The encoded protein is widely conserved across plants and animals. Loss of this gene results in a shortened circadian cycle in complete darkness. [provided by RefSeq, Feb 2014]

Details

Type
Protein Coding
Official Symbol
Cry1
Official Name
cryptochrome 1 (photolyase-like) [Source:MGI Symbol;Acc:MGI:1270841]
Ensembl ID
ENSMUSG00000020038
Bio databases IDs NCBI: 12952 Ensembl: ENSMUSG00000020038
Aliases cryptochrome 1 (photolyase-like)
Synonyms cryptochrome circadian regulator 1, DSPD, DSPS, LOC100912243, PHLL1, PHOTOLYASE
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Cry1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • PRK10674
  • ligand-dependent nuclear receptor interactor
  • protein kinase binding
  • nucleic acid binding
  • transcription factor binding
  • histone deacetylase binding
  • enzyme
  • protein binding
  • sequence-specific DNA binding
  • cryptochrome, DASH family
  • DNA binding
  • kinase binding
  • double-stranded DNA binding
  • cryptochrome, plant family
  • FAD binding domain of DNA photolyase
  • DNA photolyase
  • phosphatase binding

Pathways

Biological processes and signaling networks where the Cry1 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • arthritis
  • COVID-19
  • diabetic nephropathy
  • susceptibility to delayed sleep phase syndrome
  • weight loss
  • impaired glucose tolerance
regulated by
regulates
role in cell
  • expression in
  • migration
  • proliferation
  • activation
  • gluconeogenesis in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • Mitochondria
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Cry1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • lipid storage
  • signal transduction in response to DNA damage
  • negative regulation of gluconeogenesis
  • regulation of circadian rhythm
  • response to light stimulus
  • negative regulation of G-protein coupled receptor protein signaling pathway
  • negative regulation of circadian rhythm
  • positive regulation of gluconeogenesis
  • negative regulation of transcription from RNA polymerase II promoter
  • circadian regulation of gene expression
  • response to insulin stimulus
  • negative regulation of transcription, DNA-dependent
  • entrainment of circadian clock by photoperiod
  • positive regulation of protein ubiquitination
  • negative regulation of protein ubiquitination
  • negative regulation of glucocorticoid secretion
  • gluconeogenesis
  • blue light signaling pathway
  • circadian rhythm
  • glucose homeostasis
  • regulation of DNA damage checkpoint
  • response to glucagon stimulus
  • response to activity
  • negative regulation of glucocorticoid receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • mitochondrion

Molecular Function

What the gene product does at the molecular level
  • phosphatase binding
  • FAD binding
  • protein kinase binding
  • ligand-dependent nuclear receptor binding
  • histone deacetylase binding
  • blue light photoreceptor activity
  • double-stranded DNA binding
  • DNA binding
  • protein binding
  • DNA (6-4) photolyase activity
  • deoxyribodipyrimidine photo-lyase activity
  • E-box binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.