Srsf9 Gene Summary [Mouse]

The protein encoded by this gene is a member of the serine/arginine (SR)-rich family of pre-mRNA splicing factors, which constitute part of the spliceosome. Each of these factors contains an RNA recognition motif (RRM) for binding RNA and an RS domain for binding other proteins. The RS domain is rich in serine and arginine residues and facilitates interaction between different SR splicing factors. In addition to being critical for mRNA splicing, the SR proteins have also been shown to be involved in mRNA export from the nucleus and in translation. Two transcript variants, one protein-coding and the other not protein-coding, have been found for this gene. [provided by RefSeq, Sep 2010]

Details

Type
Protein Coding
Official Symbol
Srsf9
Official Name
serine and arginine-rich splicing factor 9 [Source:MGI Symbol;Acc:MGI:104896]
Ensembl ID
ENSMUSG00000029538
Bio databases IDs NCBI: 108014 Ensembl: ENSMUSG00000029538
Aliases serine and arginine-rich splicing factor 9
Synonyms 2610029M16Rik, serine and arginine-rich splicing factor 9, SFRS9, SRp30c
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Srsf9 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • arginine serine dipeptide repeat domain
  • RNA recognition motif (RRM) superfamily
  • RNA recognition motif
  • protein domain specific binding
  • enzyme
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • psoriasis
regulated by
  • dimethyl sulfoxide
  • ACH-2 cells
  • j1.1 cells
  • GABA
  • WNT3A
  • UT-143
  • AGRN
  • SRPK2
  • NOMO
  • CST5
regulates
role in cell
  • expression in
  • splicing by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • spliceosomes
  • nucleoplasm
  • nucleoli
  • interchromatin granule clusters
  • paraspeckle-like structures

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Srsf9 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of nuclear mRNA splicing, via spliceosome
  • alternative nuclear mRNA splicing, via spliceosome
  • mRNA splice site selection
  • response to alkaloid
  • mRNA processing
  • response to toxin

Cellular Component

Where in the cell the gene product is active
  • nuclear speck
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein domain specific binding
  • protein binding
  • RNA binding

Gene-Specific Assays for Results You Can Trust

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