Lsm7 Gene Summary [Mouse]

Predicted to enable protein heterodimerization activity. Predicted to contribute to RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to act upstream of or within mRNA catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of several cellular components, including Lsm1-7-Pat1 complex; spliceosomal complex; and spliceosomal snRNP complex. Is expressed in central nervous system and sensory organ. Orthologous to human LSM7 (LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Lsm7
Official Name
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:MGI Symbol;Acc:MGI:1913344]
Ensembl ID
ENSMUSG00000035215
Bio databases IDs NCBI: 66094 Ensembl: ENSMUSG00000035215
Aliases LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
Synonyms 0910001B06Rik, 1110033F18Rik, LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, YNL147W
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Lsm7 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Sm and related proteins
  • protein binding
  • protein heterodimerization

Pathways

Biological processes and signaling networks where the Lsm7 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic kidney disease
  • leukodystrophy
  • papillary thyroid carcinoma
  • papillary thyroid cancer
  • lichen planus
regulated by
  • WPMY-1 cells
  • delta-9-tetrahydrocannabinol
  • EIF4E
  • Major late
  • epithelial cells
  • RASSF5
  • DAP3
role in cell
  • splicing by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • cytosol
  • spliceosomes
  • nucleoplasm
  • Cajal bodies

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Lsm7 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • nuclear-transcribed mRNA catabolic process
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • U12-type spliceosomal complex
  • catalytic step 2 spliceosome
  • U4/U6 x U5 tri-snRNP complex
  • cytosol
  • U2-type prespliceosome
  • U2-type precatalytic spliceosome
  • U6 snRNP
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • U6 snRNA binding
  • RNA binding
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.