Mbd3 Gene Summary [Mouse]

This gene encodes a member of the MBD family of nuclear proteins that contain a methyl-CpG binding domain (MBD). The encoded protein is a component of the nucleosome remodeling and histone deacetylation (NuRD) complex. Deletion of this gene causes embryonic lethality in mice. Embryonic stem cells lacking the encoded protein are severely compromised in their ability to differentiate and fail to commit to developmental lineages in the absence of leukemia inhibitory factor. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2015]

Details

Type
Protein Coding
Official Symbol
Mbd3
Official Name
methyl-CpG binding domain protein 3 [Source:MGI Symbol;Acc:MGI:1333812]
Ensembl ID
ENSMUSG00000035478
Bio databases IDs NCBI: 17192 Ensembl: ENSMUSG00000035478
Aliases methyl-CpG binding domain protein 3
Synonyms methyl-CpG binding domain protein 3
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Mbd3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • methyl-CpG binding
  • p55-binding region of Methyl-CpG-binding domain proteins MBD
  • coiled-coil domain
  • protein binding
  • MBD
  • C-terminal domain of methyl-CpG binding protein 2 and 3
  • DNA binding

Pathways

Biological processes and signaling networks where the Mbd3 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • hyperplasia
  • neoplasia
  • liver cancer
  • epithelial cancer
  • prostate cancer
  • rectal adenocarcinoma
  • colorectal carcinomagenesis
  • rectum cancer
  • gastric cancer
  • breast carcinoma
regulates
role in cell
  • proliferation
  • migration
  • expression in
  • differentiation
  • phosphorylation in
  • growth
  • invasion by
  • colony formation by
  • remodeling
  • binding in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • nuclear fraction
  • heterochromatin
  • Cytoplasm
  • centrosome
  • nuclear foci
  • nucleoplasm
  • nucleoli
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Mbd3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell fate specification
  • embryonic organ development
  • methylation-dependent chromatin silencing
  • negative regulation of transcription from RNA polymerase II promoter
  • chromatin remodeling
  • ventricular cardiac muscle tissue development
  • negative regulation of transcription, DNA-dependent
  • in utero embryonic development
  • positive regulation of transcription, DNA-dependent
  • regulation of stem cell differentiation
  • response to estradiol stimulus
  • response to nutrient levels

Cellular Component

Where in the cell the gene product is active
  • heterochromatin
  • nucleus
  • cytoplasm
  • NuRD complex
  • macromolecular complex
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • nucleosomal DNA binding
  • methyl-CpG binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.