Cldn9 Gene Summary [Mouse]

This intronless gene encodes a member of the claudin family. Claudins are integral membrane proteins and components of tight junction strands. Tight junction strands serve as a physical barrier to prevent solutes and water from passing freely through the paracellular space between epithelial or endothelial cell sheets, and also play critical roles in maintaining cell polarity and signal transductions. This gene is developmentally regulated; it is expressed in neonate kidney, but disappers by adulthood. It is required for the preservation of sensory cells in the hearing organ and the gene deficiency is associated with deafness. [provided by RefSeq, Aug 2010]

Details

Type
Protein Coding
Official Symbol
Cldn9
Official Name
claudin 9 [Source:MGI Symbol;Acc:MGI:1913100]
Ensembl ID
ENSMUSG00000066720
Bio databases IDs NCBI: 56863 Ensembl: ENSMUSG00000066720
Aliases claudin 9
Synonyms claudin 9, DFNB116, LOC100134406, nmf329
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Cldn9 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • viral receptor
  • PMP-22/EMP/MP20/Claudin family
  • extracellular loop
  • protein binding
  • identical protein binding

Pathways

Biological processes and signaling networks where the Cldn9 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • colon adenocarcinoma
  • autosomal recessive deafness type 116
  • colon epithelial cancer
regulated by
regulates
role in cell
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell junction
  • intracellular membrane-bounded organelle
  • cellular membrane
  • tight junctions

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Cldn9 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral entry into host cell
  • calcium-independent cell-cell adhesion
  • tight junction assembly
  • cell adhesion

Cellular Component

Where in the cell the gene product is active
  • tight junction
  • intracellular membrane-bounded organelle
  • cell junction
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • protein binding
  • structural molecule activity
  • viral receptor activity

Gene-Specific Assays for Results You Can Trust

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