Foxn3 Gene Summary [Rat]

Predicted to enable DNA-binding transcription factor activity and cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in mitotic G2 DNA damage checkpoint signaling and negative regulation of DNA-templated transcription. Predicted to act upstream of or within craniofacial suture morphogenesis. Predicted to be active in nucleus. Orthologous to human FOXN3 (forkhead box N3). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Foxn3
Official Name
forkhead box N3 [Source:RGD Symbol;Acc:1305711]
Ensembl ID
ENSRNOG00000004709
Bio databases IDs NCBI: 314374 Ensembl: ENSRNOG00000004709
Aliases forkhead box N3
Synonyms 5430426H20Rik, AW556347, C14ORF116, CHES1, CHES1L, forkhead box N3, HTLFL1, LOC100039892, PRO1635
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Foxn3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • SKIP-binding domain
  • FH_FOX
  • Sin3 binding domain
  • protein binding
  • Forkhead domain
  • FORKHEAD

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • ischemic stroke
  • Huntington disease
  • acute myeloid leukemia
  • non-insulin-dependent diabetes mellitus
  • idiopathic intracranial hypertension
  • small cell lung carcinoma
  • small cell lung cancer
  • ovarian carcinoma
  • epithelial ovarian cancer
  • hepatic fibrosis
regulated by
  • STK11
  • dexamethasone
  • cisplatin
  • AGT
  • MYB
  • Immunoglobulin
  • INPP5D
  • camptothecin
  • beta-estradiol
  • lapatinib
role in cell
  • proliferation
  • expression in
  • phosphorylation in
  • G2/M phase
  • transcription in
  • synthesis in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Foxn3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • mitotic cell cycle G2/M transition DNA damage checkpoint
  • negative regulation of transcription, DNA-dependent
  • regulation of transcription, DNA-dependent
  • craniofacial suture morphogenesis
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatin

Molecular Function

What the gene product does at the molecular level
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • core promoter proximal region sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.