LOC100360057 Gene Summary [Rat]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a cytoplasmic ribosomal protein that is a component of the 60S subunit. The protein belongs to the L22E family of ribosomal proteins. Its initiating methionine residue is post-translationally removed. The protein can bind specifically to Epstein-Barr virus-encoded RNAs (EBERs) 1 and 2. The mouse protein has been shown to be capable of binding to heparin. Transcript variants utilizing alternative polyA signals exist. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. It was previously thought that this gene mapped to 3q26 and that it was fused to the acute myeloid leukemia 1 (AML1) gene located at 21q22 in some therapy-related myelodysplastic syndrome patients with 3;21 translocations; however, these fusions actually involve a ribosomal protein L22 pseudogene located at 3q26, and this gene actually maps to 1p36.3-p36.2. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
LOC100360057
Official Name
ribosomal protein L22-like [Source:RGD Symbol;Acc:2322888]
Ensembl ID
ENSRNOG00000011104
Bio databases IDs NCBI: 100360057 NCBI: 81768 Ensembl: ENSRNOG00000011104
Aliases ribosomal protein L22-like
Synonyms 2700038K18Rik, EAP, eL22, HBP15, HBP15/L22, L22, Ribosomal protein L22
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Loc100360057 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • structural constituent of ribosome
  • Ribosomal L22e protein family
  • protein binding
  • heparin binding
  • identical protein binding
  • translation regulator
  • RNA binding

Pathways

Biological processes and signaling networks where the Loc100360057 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • uterine corpus endometrioid carcinoma
  • epithelial uterine cancer
  • uterine corpus cancer
  • endometrioid cancer
  • head and neck squamous cell carcinoma
  • head and neck squamous cell cancer
  • renal clear cell adenocarcinoma
regulated by
role in cell
  • phosphorylation in
  • expression in
  • differentiation
  • synthesis in
  • development
  • adherence

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • glutaminergic synapse
  • presynaptic regions
  • ribosome
  • Nucleus
  • cytosol
  • nucleoli
  • synapse

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Loc100360057 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cytoplasmic translation
  • alpha-beta T cell differentiation
  • translation

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • extracellular vesicular exosome
  • focal adhesion
  • cytosolic ribosome
  • cytoplasm
  • cytosol
  • cytosolic large ribosomal subunit

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • RNA binding
  • protein binding
  • structural constituent of ribosome
  • heparin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.