LOC103690054 Gene Summary [Rat]
Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to contribute to DNA-directed RNA polymerase activity. Predicted to be involved in maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II; transcription initiation at RNA polymerase II promoter; and transcription-coupled nucleotide-excision repair. Predicted to be located in nucleoplasm. Predicted to be part of RNA polymerase II, core complex. Orthologous to human POLR2I (RNA polymerase II subunit I). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Protein Coding |
| Official Symbol | LOC103690054 |
| Official Name | DNA-directed RNA polymerase II subunit RPB9 [Source:RGD Symbol;Acc:9095262] |
| Ensembl ID | ENSRNOG00000020799 |
| Bio databases IDs | |
| Aliases | DNA-directed RNA polymerase II subunit RPB9 |
| Synonyms | 2810002B19Rik, hRPB14.5, LOC100911822, LOC103690054, polymerase (RNA) II (DNA directed) polypeptide I, RNA polymerase II subunit I, RPB9 |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Loc103690054 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- transcription regulator
- zinc ion binding
- DNA-directed RNA polymerase
- Zn-ribbon
- RNA polymerases M/15 Kd subunit
- protein binding
Pathways
Biological processes and signaling networks where the Loc103690054 gene in rat plays a role, providing insight into its function and relevance in health or disease.
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- nucleoplasm
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Loc103690054 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- transcription-coupled nucleotide-excision repair
- maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter
- transcription from RNA polymerase II promoter
- transcription initiation from RNA polymerase II promoter
Cellular Component
Where in the cell the gene product is active
- nucleus
- nucleolus
- DNA-directed RNA polymerase II, core complex
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- nucleic acid binding
- zinc ion binding
- protein binding
- DNA-directed RNA polymerase activity