Smc2 Gene Summary [Rat]
Predicted to enable chromatin binding activity and single-stranded DNA binding activity. Predicted to be involved in mitotic chromosome condensation; positive regulation of chromosome condensation; and regulation of chromosome segregation. Predicted to act upstream of or within kinetochore organization; meiotic chromosome condensation; and meiotic chromosome segregation. Predicted to be located in cytoplasm and nuclear lumen. Predicted to be part of condensin complex. Predicted to be active in chromatin and condensed chromosome. Human ortholog(s) of this gene implicated in colon adenocarcinoma. Orthologous to human SMC2 (structural maintenance of chromosomes 2). [provided by Alliance of Genome Resources, Jul 2025]
Details
| Type | Protein Coding |
| Official Symbol | Smc2 |
| Official Name | structural maintenance of chromosomes 2 [Source:RGD Symbol;Acc:1305227] |
| Ensembl ID | ENSRNOG00000022325 |
| Bio databases IDs | |
| Aliases | structural maintenance of chromosomes 2 |
| Synonyms | 5730502P04Rik, CAP-E, Fin16, SMC2L1, structural maintenance of chromosomes 2 |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Smc2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- chromosome segregation protein SMC, primarily archaeal type
- SMC proteins Flexible Hinge Domain
- exonuclease SbcC
- Ciliary protein causing Leber congenital amaurosis disease
- PspA/IM30 family
- rad50
- coiled-coil domain
- chromatin binding
- protein binding
- AAA domain
- chromosome segregation protein SMC, common bacterial type
- RecF/RecN/SMC N terminal domain
- Tropomyosin
- single-stranded DNA binding
- Growth-arrest specific micro-tubule binding
- RsfA
- HOOK protein coiled-coil region
- transporter
- Domain of unknown function (DUF4200)
Pathways
Biological processes and signaling networks where the Smc2 gene in rat plays a role, providing insight into its function and relevance in health or disease.
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
- ovarian carcinoma
- epithelial ovarian cancer
- epithelial cancer
- epithelial basal cell carcinoma
- MYC mutation positive B-cell lymphoma
- lymphomagenesis
- B cell cancer
- breast carcinoma
- aortic stenosis
- serous ovarian adenocarcinoma
role in cell
- cell viability
- growth
- morphology
- condensation
- organization
- segregation
- structure
- activity
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- nuclear fraction
- chromatin fraction
- pH resistant lipid raft fraction
- sister chromatid arm
- Cytoplasm
- cytosol
- nuclear foci
- chromosome
- nucleoplasm
- nucleoli
- germinal vesicles
- centromeres
- chromosomal arms
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Smc2 gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- cell division
- positive regulation of chromosome segregation
- meiotic chromosome condensation
- mitotic chromosome condensation
- kinetochore organization
- meiotic chromosome segregation
Cellular Component
Where in the cell the gene product is active
- condensed chromosome
- nucleus
- extracellular vesicular exosome
- cytoplasm
- cytosol
- nuclear chromosome
- nucleolus
- condensin complex
- chromatin
- nucleoplasm
- condensed nuclear chromosome
Molecular Function
What the gene product does at the molecular level
- ATPase activity
- ATP binding
- protein binding
- chromatin binding
- single-stranded DNA binding