CDH9

CDH9 Gene Summary

This gene encodes a type II classical cadherin from the cadherin superfamily, integral membrane proteins that mediate calcium-dependent cell-cell adhesion. Mature cadherin proteins are composed of a large N-terminal extracellular domain, a single membrane-spanning domain, and a small, highly conserved C-terminal cytoplasmic domain. The extracellular domain consists of 5 subdomains, each containing a cadherin motif, and appears to determine the specificity of the protein's homophilic cell adhesion activity. Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I cadherins. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
CDH9
Official Name
cadherin 9 [Source:HGNC Symbol;Acc:HGNC:1768]
Ensembl ID
ENSG00000113100
Bio databases IDs NCBI: 1007 Ensembl: ENSG00000113100
Aliases cadherin 9
Synonyms
cadherin 9,T1-cadherin
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Cadherin, Y-type LIR-motif
  • cell adhesion molecule binding
  • Cadherin repeat-like domain
  • cadherin binding
  • identical protein binding

Pathways

Biological processes and signaling networks where the CDH9 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • ELAVL1
  • MEOX2
  • CTNNB1
  • KIF14
  • KIF20A
disease
  • depressive disorder
  • dental caries
  • major depression
  • neuroticism
  • coronary artery disease
regulated by
  • tetrodotoxin
  • GDF2
  • FOXP1
  • SNCA
  • geldanamycin
  • FFAR3
  • estrogen receptor
  • GRIN3A
  • RNASEL
  • SRF
regulates
role in cell
  • adhesion
  • assembly

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • cellular membrane
  • presynaptic membrane
  • postsynaptic membrane
  • synapse
  • axons
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the CDH9 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • calcium-dependent cell-cell adhesion
  • synapse assembly
  • cell-cell junction assembly
  • adherens junction organization
  • multicellular organismal development
  • cell morphogenesis
  • cell-cell adhesion mediated by cadherin
  • homophilic cell adhesion
  • cell migration

CELLULAR COMPONENT

Where in the cell the gene product is active
  • presynaptic membrane
  • adherens junction
  • postsynaptic membrane
  • catenin complex
  • plasma membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • calcium ion binding
  • cadherin binding
  • beta-catenin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.