Pard6a Gene Summary [Rat]

The protein encoded by this gene is a component of the partitioning defective complex, a protein complex involved in controlling epithelial cell polarity as well as other cell processes. In rat testis cells, the protein localizes to the apical ectoplasmic specialization at the Sertoli-elongating spermatid interface and at the blood-testis barrier. Accordingly, knockdown of this gene in Sertoli cell epithelia results in compromised blood-testis barrier integrity. Knockdown of this gene in various neuronal cell types results in a variety of phenotypes including abnormal dendritic spine morphogenesis and defective axon outgrowth to the spinal midline. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2015]

Details

Type
Protein Coding
Official Symbol
Pard6a
Official Name
par-6 family cell polarity regulator alpha [Source:RGD Symbol;Acc:1303273]
Ensembl ID
ENSRNOG00000017746
Bio databases IDs NCBI: 307799 Ensembl: ENSRNOG00000017746
Aliases par-6 family cell polarity regulator alpha
Synonyms 0710008C04Rik, 2610010A15RIK, MPAR6, PAR6, PAR-6A, PAR6alpha, PAR6C, par-6 family cell polarity regulator alpha, par-6 family cell polarity regulator α, TAX40, TIP-40
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Pard6a often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Domain present in PSD-95, Dlg, and ZO-1/2
  • GTP-dependent protein binding
  • canonical PDZ domain
  • enzyme binding
  • protein binding
  • PDZ domain
  • PB1
  • Phox and Bem1 domain

Pathways

Biological processes and signaling networks where the Pard6a gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplastic cell transformation
regulated by
regulates
role in cell
  • expression in
  • phosphorylation in
  • formation
  • growth
  • binding in
  • inhibition in
  • polarization
  • loss
  • invasion by
  • movement

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell junction
  • axon component
  • Cytoplasm
  • perinuclear region
  • cell cortex
  • Nucleus
  • centrosome
  • cell-cell contacts
  • cytosol
  • primary cilia
  • membrane ruffles
  • spindle pole
  • nuclear speckles
  • growth cone
  • tight junctions
  • mitotic spindle
  • perikaryon

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Pard6a gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell division
  • regulation of cellular localization
  • centrosome cycle
  • negative regulation of protein phosphorylation
  • establishment or maintenance of epithelial cell apical/basal polarity
  • establishment or maintenance of cell polarity
  • viral reproduction
  • positive regulation of protein secretion
  • cell-cell junction maintenance

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • tight junction
  • centrosome
  • occluding junction
  • centriolar satellite
  • cell cortex
  • ruffle
  • cytosol
  • plasma membrane
  • apical plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • small GTPase binding
  • GTP-dependent protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.