AP3D1 Gene Summary [Human]

The protein encoded by this gene is a subunit of the AP3 adaptor-like complex, which is not clathrin-associated, but is associated with the golgi region, as well as more peripheral structures. The AP-3 complex facilitates the budding of vesicles from the golgi membrane, and may be directly involved in trafficking to lysosomes. This subunit is implicated in intracellular biogenesis and trafficking of pigment granules, and possibly platelet dense granules and neurotransmitter vesicles. Defects in this gene are a cause of a new type of Hermansky-Pudlak syndrome. [provided by RefSeq, Feb 2017]

Details

Type
Protein Coding
Official Symbol
AP3D1
Official Name
adaptor related protein complex 3 subunit delta 1 [Source:HGNC Symbol;Acc:HGNC:568]
Ensembl ID
ENSG00000065000
Bio databases IDs NCBI: 8943 Ensembl: ENSG00000065000
Aliases adaptor related protein complex 3 subunit delta 1
Synonyms adaptor-related protein complex 3, delta 1 subunit, adaptor related protein complex 3 subunit delta 1, adaptor related protein complex 3 subunit δ 1, adaptor-related protein complex 3, δ 1 subunit, ADTD, AP3D, AP3D1 isoform 1, Ap3 δ, Bolvr, delta ADAPTIN, hBLVR, HPS10, mBLVR1, mh, mocha, δ ADAPTIN
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human AP3D1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • non-SMC mitotic condensation complex subunit 1
  • AP-3 complex subunit delta-1
  • protein binding
  • Adaptin N terminal region

Pathways

Biological processes and signaling networks where the AP3D1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • schizophrenia
  • renal clear cell adenocarcinoma
  • renal clear cell cancer
  • epithelial cancer
  • Hermansky-Pudlak syndrome
  • Hermansky-Pudlak syndrome 10
  • myocardial infarction
  • idiopathic scoliosis
  • generalized epilepsy
  • kidney carcinoma
regulated by
regulates
  • IL6
  • IL1B
  • TNF
  • DNA promoter
  • DNA endogenous promoter
  • heavy metal
  • GAG
  • MHC I (complex)
  • M06
  • RNA polymerase II
role in cell
  • differentiation
  • activation
  • size
  • organization
  • production
  • function in
  • acidification

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • glutaminergic synapse
  • presynaptic regions
  • cell periphery
  • perinuclear region
  • postsynaptic region
  • cellular membrane
  • endosomes
  • Golgi Apparatus
  • trans Golgi network
  • endosomal membrane
  • dendritic spines
  • neurites
  • nerve ending
  • synaptosomes
  • perikaryon
  • axons
  • axon terminals
  • mossy fibers
  • cytoplasmic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human AP3D1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • platelet dense granule organization
  • anterograde axon cargo transport
  • intracellular transport
  • antigen processing and presentation, exogenous lipid antigen via MHC class Ib
  • positive regulation of transcription from RNA polymerase II promoter
  • intracellular protein transport
  • protein targeting to vacuole
  • Golgi to vacuole transport
  • melanosome organization
  • vesicle-mediated transport
  • synaptic vesicle budding from endosome
  • synaptic vesicle coating
  • synaptic vesicle membrane organization
  • protein localization in membrane
  • endosome to melanosome transport
  • cargo loading into clathrin-coated vesicle, AP-3-mediated
  • positive regulation of NK T cell differentiation
  • anterograde synaptic vesicle transport

Cellular Component

Where in the cell the gene product is active
  • early endosome
  • terminal button
  • membrane
  • AP-3 adaptor complex
  • Golgi membrane
  • endosome membrane
  • Golgi apparatus
  • lysosomal membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.