F9 Gene Summary [Human]

This gene encodes vitamin K-dependent coagulation factor IX that circulates in the blood as an inactive zymogen. This factor is converted to an active form by factor XIa, which excises the activation peptide and thus generates a heavy chain and a light chain held together by one or more disulfide bonds. The role of this activated factor IX in the blood coagulation cascade is to activate factor X to its active form through interactions with Ca+2 ions, membrane phospholipids, and factor VIII. Alterations of this gene, including point mutations, insertions and deletions, cause factor IX deficiency, which is a recessive X-linked disorder, also called hemophilia B or Christmas disease. Alternative splicing results in multiple transcript variants encoding different isoforms that may undergo similar proteolytic processing. [provided by RefSeq, Sep 2015]

Details

Type
Protein Coding
Official Symbol
F9
Official Name
coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]
Ensembl ID
ENSG00000101981
Bio databases IDs NCBI: 2158 Ensembl: ENSG00000101981
Aliases coagulation factor IX, Factor IX, plasma thromboplastic component, Christmas disease, hemophilia B
Synonyms BAX326, Cf-9, coagulation factor IX, coagulation factor IX [recombinant], F9 p22, factor IX concentrate, FIX, HEMB, Nonacog alfa, nonacog gamma, nonacog γ, P19, plasma-derived factor IX, PTC, recombinant coagulation factor IX, recombinant factor IX, rFactor IX, rFIX, rixubis, THPH8
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human F9 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Trypsin-like serine protease
  • calcium-binding EGF-like domain
  • Tryp_SPc
  • peptidase
  • Human growth factor-like EGF
  • calcium ion binding
  • metal ion binding
  • protein binding
  • EGF-like domain
  • EGF_CA
  • protease domain
  • endopeptidase
  • trypsin
  • coagulation factor IXa
  • spacer domain
  • loop domain
  • Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain
  • Coagulation Factor Xa inhibitory site

Pathways

Biological processes and signaling networks where the F9 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • cardiovascular disorder
  • stroke
  • migraines
  • myocardial infarction
  • epithelial cancer
  • cancer
  • cardiovascular death
  • chronic renal failure
  • inhibitor positive hemophilia A
  • hemophilia B
regulated by
regulates
role in cell
  • proliferation
  • binding
  • expression in
  • cell cycle progression
  • transduction
  • cell-mediated response

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • Golgi lumen
  • Plasma Membrane
  • endoplasmic reticulum lumen
  • secretory granules
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human F9 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • zymogen activation
  • proteolysis
  • blood coagulation

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • extracellular vesicular exosome
  • Golgi lumen
  • extracellular region
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • metal ion binding
  • calcium ion binding
  • serine-type endopeptidase activity
  • endopeptidase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.