FGD1 Gene Summary [Human]

This gene encodes a protein that contains Dbl (DH) and pleckstrin (PH) homology domains and is similar to the Rho family of small GTP-binding proteins. The encoded protein specifically binds to the Rho family GTPase Cdc42Hs and can stimulate the GDP-GTP exchange of the isoprenylated form of Cdc42Hs. It also stimulates the mitogen activated protein kinase cascade leading to c-Jun kinase SAPK/JNK1 activation. Defects in this gene are the cause of the faciogenital dysplasia in Aarskog-Scott syndrome and a syndromatic form of X-linked cognitive disability. [provided by RefSeq, Jul 2017]

Details

Type
Protein Coding
Official Symbol
FGD1
Official Name
FYVE, RhoGEF and PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3663]
Ensembl ID
ENSG00000102302
Bio databases IDs NCBI: 2245 Ensembl: ENSG00000102302
Aliases FYVE, RhoGEF and PH domain containing 1
Synonyms AAS, FGDY, FYVE, RhoGEF and PH domain containing 1, LOC102555067, LOC108348117, MRXS16, ZFYVE3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human FGD1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • FYVE zinc finger
  • enzyme binding
  • protein binding
  • Pleckstrin homology-like domain
  • proline rich domain
  • RhoGEF domain
  • FYVE domain like superfamily
  • RhoGEF
  • Protein present in Fab1, YOTB, Vac1, and EEA1
  • guanyl-nucleotide exchange factor
  • PH domain
  • PHD finger superfamily
  • Dbl homology domain

Pathways

Biological processes and signaling networks where the FGD1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • Aarskog-Scott syndrome with attention deficit-hyperactivity disorder
  • mental retardation
  • hereditary disorder
  • Aarskog-Scott syndrome
  • syndromic x-linked mental retardation type 16
  • nonsyndromic X-linked mental retardation
regulated by
regulates
role in cell
  • migration
  • invasion by
  • activation in
  • cell viability
  • formation
  • stimulation
  • polarization
  • morphology
  • assembly
  • polarization in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • ruffle
  • cellular membrane
  • actin cytoskeleton
  • cell cortex
  • Plasma Membrane
  • Golgi Apparatus
  • cytosol
  • lamellipodia

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human FGD1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell shape
  • cytoskeleton organization
  • signal transduction
  • regulation of small GTPase mediated signal transduction
  • regulation of GTPase activity
  • filopodium assembly
  • actin cytoskeleton organization
  • organ morphogenesis

Cellular Component

Where in the cell the gene product is active
  • cytoskeleton
  • cytoplasm
  • ruffle
  • cytosol
  • Golgi apparatus
  • lamellipodium

Molecular Function

What the gene product does at the molecular level
  • metal ion binding
  • guanyl-nucleotide exchange factor activity
  • small GTPase binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.