DDX50 Gene Summary [Human]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box enzyme that may be involved in ribosomal RNA synthesis or processing. This gene and DDX21, also called RH-II/GuA, have similar genomic structures and are in tandem orientation on chromosome 10, suggesting that the two genes arose by gene duplication in evolution. This gene has pseudogenes on chromosomes 2, 3 and 4. Alternative splicing of this gene generates multiple transcript variants, but the full length nature of all the other variants but one has not been defined. [provided by RefSeq, Jul 2008]

Details

Type
Nonsense Mediated Decay
Official Symbol
DDX50
Official Name
DExD-box helicase 50 [Source:HGNC Symbol;Acc:HGNC:17906]
Ensembl ID
ENSG00000107625
Bio databases IDs NCBI: 79009 Ensembl: ENSG00000107625
Aliases DExD-box helicase 50
Synonyms 4933429B04Rik, 8430408E17RIK, DExD-box helicase 50, GU2, GUB, mcdrh, RH-II, RH-II/GuB, Similar to gu2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DDX50 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • helicase superfamily c-terminal domain
  • DEAD/DEAH box helicase
  • Type III restriction enzyme, res subunit
  • N-terminal helicase domain of the DEAD-box helicase superfamily
  • enzyme
  • DEAD-like helicases superfamily
  • CRISPR-associated helicase Cas3
  • RNA-binding GUCT domain found in the RNA helicase II/Gu protein family
  • Helicase conserved C-terminal domain
  • P-loop containing Nucleoside Triphosphate Hydrolases

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • lung cancer
  • liver cancer
  • colon cancer
  • productive infection by HIV-1
regulated by
regulates
  • RNR
  • 18s

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Plasma Membrane
  • nucleoli
  • nuclear speckles

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DDX50 gene, providing context for its role in the cell.

Cellular Component

Where in the cell the gene product is active
  • membrane
  • nucleolus
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • RNA binding
  • RNA helicase activity
  • mRNA binding

Gene-Specific Assays for Results You Can Trust

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