EFNB3 Gene Summary [Human]

EFNB3, a member of the ephrin gene family, is important in brain development as well as in its maintenance. Moreover, since levels of EFNB3 expression were particularly high in several forebrain subregions compared to other brain subregions, it may play a pivotal role in forebrain function. The EPH and EPH-related receptors comprise the largest subfamily of receptor protein-tyrosine kinases and have been implicated in mediating developmental events, particularly in the nervous system. EPH Receptors typically have a single kinase domain and an extracellular region containing a Cys-rich domain and 2 fibronectin type III repeats. The ephrin ligands and receptors have been named by the Eph Nomenclature Committee (1997). Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to the membrane by a glycosylphosphatidylinositol linkage, and the ephrin-B (EFNB) class, which are transmembrane proteins. The Eph family of receptors are similarly divided into 2 groups based on the similarity of their extracellular domain sequences and their affinities for binding ephrin-A and ephrin-B ligands. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
EFNB3
Official Name
ephrin B3 [Source:HGNC Symbol;Acc:HGNC:3228]
Ensembl ID
ENSG00000108947
Bio databases IDs NCBI: 1949 Ensembl: ENSG00000108947
Aliases ephrin B3, EPH-related receptor tyrosine kinase ligand 8
Synonyms EFL-6, ELF-3, ELK-L3, EPHRIN B3, Epl8, EPLG8, LERK-8, NLERK-2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human EFNB3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • kinase
  • extracellular domain
  • transmembrane-ephrin receptor
  • Ephrin
  • Cupredoxin superfamily
  • ephrin receptor binding
  • protein binding
  • cytosolic tail domain

Pathways

Biological processes and signaling networks where the EFNB3 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • prostate cancer
  • glioblastoma cancer
  • doxorubicin induced cardiotoxicity
  • glioblastoma
  • gait disturbance
regulated by
  • heavy metal
  • decitabine
  • SP2509
  • memantine
  • tazemetostat
  • trichostatin A
  • DNMT1
  • STEAP3
  • poly rI:rC-RNA
  • ERBB2
regulates
role in cell
  • expression in
  • proliferation
  • formation
  • migration
  • growth
  • collapse
  • axonogenesis
  • outgrowth
  • innervation
  • density

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • cell surface
  • cellular membrane
  • presynaptic membrane
  • synaptic membrane
  • synapse

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human EFNB3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral entry into host cell
  • adult walking behavior
  • negative regulation of axonogenesis
  • T cell costimulation
  • positive regulation of synaptic transmission
  • ephrin receptor signaling pathway
  • cell-cell signaling
  • nervous system development
  • axon choice point recognition
  • axon guidance

Cellular Component

Where in the cell the gene product is active
  • presynaptic membrane
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • ephrin receptor binding
  • viral receptor activity
  • transmembrane-ephrin receptor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.