PIKFYVE Gene Summary [Human]

Phosphorylated derivatives of phosphatidylinositol (PtdIns) regulate cytoskeletal functions, membrane trafficking, and receptor signaling by recruiting protein complexes to cell- and endosomal-membranes. Humans have multiple PtdIns proteins that differ by the degree and position of phosphorylation of the inositol ring. This gene encodes an enzyme (PIKfyve; also known as phosphatidylinositol-3-phosphate 5-kinase type III or PIPKIII) that phosphorylates the D-5 position in PtdIns and phosphatidylinositol-3-phosphate (PtdIns3P) to make PtdIns5P and PtdIns(3,5)biphosphate. The D-5 position also can be phosphorylated by type I PtdIns4P-5-kinases (PIP5Ks) that are encoded by distinct genes and preferentially phosphorylate D-4 phosphorylated PtdIns. In contrast, PIKfyve preferentially phosphorylates D-3 phosphorylated PtdIns. In addition to being a lipid kinase, PIKfyve also has protein kinase activity. PIKfyve regulates endomembrane homeostasis and plays a role in the biogenesis of endosome carrier vesicles from early endosomes. The protein plays a key role in cell entry of ebola virus and SARS-CoV-2 by endocytosis Mutations in this gene cause corneal fleck dystrophy (CFD); an autosomal dominant disorder characterized by numerous small white flecks present in all layers of the corneal stroma. Histologically, these flecks appear to be keratocytes distended with lipid and mucopolysaccharide filled intracytoplasmic vacuoles. [provided by RefSeq, Jul 2021]

Details

Type
Protein Coding
Official Symbol
PIKFYVE
Official Name
phosphoinositide kinase, FYVE-type zinc finger containing [Source:HGNC Symbol;Acc:HGNC:23785]
Ensembl ID
ENSG00000115020
Bio databases IDs NCBI: 200576 Ensembl: ENSG00000115020
Aliases phosphoinositide kinase, FYVE-type zinc finger containing, zinc finger, FYVE domain containing 29
Synonyms 5230400C17RIK, CFD, FAB1, HEL37, KIAA0981, p235, phosphoinositide kinase, FYVE-type zinc finger containing, PI5K, PIP5K, PIP5K3, Pipk5k3, PipkIII, Type III PI 5-kinase, ZFYVE29
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PIKFYVE often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
  • FYVE zinc finger
  • protein serine/threonine kinase
  • lipid kinase
  • catalytic domain
  • Phosphatidylinositol-4-phosphate 5-Kinase
  • protein binding
  • kinase
  • FYVE domain like superfamily
  • DEP
  • kinase domain
  • Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family
  • zinc ion binding
  • Protein present in Fab1, YOTB, Vac1, and EEA1
  • alcohol group acceptor phosphotransferase
  • phosphatase
  • PHD finger superfamily
  • 1-phosphatidylinositol-3-phosphate 5-kinase
  • chaperonin_like
  • 1-phosphatidylinositol-4-phosphate 5-kinase

Pathways

Biological processes and signaling networks where the PIKFYVE gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • pneumonitis
  • fleck corneal dystrophy
  • Hutchinson-Gilford progeria syndrome
  • rotator cuff injury
  • asthma
  • hepatosplenomegaly
regulated by
  • FIG4
  • insulin
  • wortmannin
  • AMPK
  • INS
  • SB203580
  • Sb202190
  • diphtheria toxin
  • GF 120918
  • dexamethasone
regulates
role in cell
  • thickness
  • expression in
  • phosphorylation in
  • production in
  • invasiveness
  • proliferation
  • activation in
  • molecular cleavage in
  • maturation
  • formation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • plasma membrane fraction
  • low-density microsomal fraction
  • membrane fraction
  • cytoskeleton
  • cell periphery
  • perinuclear region
  • intracellular membranes
  • cellular membrane
  • Plasma Membrane
  • endosomes
  • intercellular junctions
  • cytosol
  • vesicle membrane
  • Golgi membrane
  • endosomal membrane
  • early endosomes
  • late endosomes
  • cytoplasmic vesicles
  • membrane rafts
  • Golgi vesicles
  • phagosomes
  • cytoskeletal fraction
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PIKFYVE gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • phosphatidylinositol-3-phosphate biosynthetic process
  • phagosome-lysosome fusion
  • phagosome maturation
  • phosphatidylinositol biosynthetic process
  • retrograde transport, endosome to Golgi
  • protein targeting to membrane
  • receptor-mediated endocytosis
  • melanosome organization
  • viral entry into host cell via receptor-mediated endocytosis
  • regulation of autophagic vacuole assembly
  • neutrophil chemotaxis
  • myelin assembly
  • antigen processing and presentation of exogenous peptide antigen via MHC class II
  • protein localization to nucleus
  • intracellular signal transduction

Cellular Component

Where in the cell the gene product is active
  • early endosome membrane
  • late endosome membrane
  • cell-cell junction
  • perinuclear region of cytoplasm
  • vesicle membrane
  • membrane raft
  • cytosol
  • phagocytic vesicle membrane
  • cytoplasmic vesicle
  • Golgi membrane
  • endosome membrane

Molecular Function

What the gene product does at the molecular level
  • phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
  • ATP binding
  • zinc ion binding
  • 1-phosphatidylinositol-3-phosphate 5-kinase activity
  • protein binding
  • 1-phosphatidylinositol-4-phosphate 5-kinase activity
  • protein serine/threonine kinase activity
  • 1-phosphatidylinositol-5-kinase activity

Gene-Specific Assays for Results You Can Trust

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