ATF6

ATF6 Gene Summary

This gene encodes a transcription factor that activates target genes for the unfolded protein response (UPR) during endoplasmic reticulum (ER) stress. Although it is a transcription factor, this protein is unusual in that it is synthesized as a transmembrane protein that is embedded in the ER. It functions as an ER stress sensor/transducer, and following ER stress-induced proteolysis, it functions as a nuclear transcription factor via a cis-acting ER stress response element (ERSE) that is present in the promoters of genes encoding ER chaperones. This protein has been identified as a survival factor for quiescent but not proliferative squamous carcinoma cells. There have been conflicting reports about the association of polymorphisms in this gene with diabetes in different populations, but another polymorphism has been associated with increased plasma cholesterol levels. This gene is also thought to be a potential therapeutic target for cystic fibrosis. [provided by RefSeq, Aug 2011]

Details

Type
Protein Coding
Official Symbol
ATF6
Official Name
activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
Ensembl ID
ENSG00000118217
Bio databases IDs NCBI: 22926 Ensembl: ENSG00000118217
Aliases activating transcription factor 6, activating transcription factor 6 alpha
Synonyms
9130025P16RIK,9630036G24,AA789574,ACHM7,activating transcription factor 6,activating transcription factor 6 β,ATF6A,ATF6 alpha,Atf6 (predicted),ATF6 α,ATP6alpha,ESTM49
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • activation domain
  • transcription regulator
  • nucleic acid binding
  • transcription activation domain
  • enzyme binding
  • Basic region leucine zipper
  • protein binding
  • sequence-specific DNA binding
  • identical protein binding
  • zDHHC ankyrin repeat binding domain
  • endoplasmic reticulum lumenal domain
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • basic helix-loop-helix-leucine zipper domain
  • N-linked glycosylation site
  • cytoplasmic domain
  • double-stranded DNA binding
  • lumenal domain
  • transmembrane domain
  • bZIP
  • transcription factor activity
  • protein heterodimerization
  • basic region leucin zipper

Pathways

Biological processes and signaling networks where the ATF6 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • XBP1
  • NF-Y
  • Nfy
  • CDK8
  • TMEM201
  • DET1
  • CALR
  • TRIM25
  • ELOVL5
  • PCDH20
disease
  • osteoarthritis
  • arthritis
  • diabetes mellitus
  • Parkinson disease
  • atopic dermatitis
  • neoplasia
  • foveal hypoplasia
  • achromatopsia 7
  • prostate cancer
  • immunodeficiency
regulated by
  • NR3C1
  • MMP11
  • TGFB1
  • D-glucose
  • IL6
  • Immunoglobulin
  • TAT
  • FGFR1
  • THBS4
  • TLR4
regulates
  • MTOR
  • CASP3
  • cholesterol
  • TNF
  • lipid
  • triacylglycerol
  • MMP1
  • IL6
  • NFkB (complex)
  • BAX
role in cell
  • phosphorylation in
  • activation in
  • molecular cleavage in
  • cell viability
  • expression in
  • induction in
  • degradation in
  • apoptosis
  • proliferation
  • upregulation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • microsomal fraction
  • nuclear fraction
  • nuclear membrane fraction
  • perinuclear region
  • cellular membrane
  • filamentous network
  • Nucleus
  • Golgi Apparatus
  • Endoplasmic Reticulum
  • cytosol
  • endoplasmic reticulum membrane
  • Golgi membrane
  • nucleoplasm
  • perinuclear space
  • nuclear envelope
  • chromatin
  • perikaryon

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the ATF6 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • positive regulation of autophagy
  • eye development
  • signal transduction
  • endoplasmic reticulum unfolded protein response
  • positive regulation of apoptotic process
  • protein folding
  • positive regulation of transcription from RNA polymerase II promoter
  • visual perception
  • response to endoplasmic reticulum stress
  • regulation of transcription from RNA polymerase II promoter

CELLULAR COMPONENT

Where in the cell the gene product is active
  • nuclear envelope
  • endoplasmic reticulum membrane
  • nucleus
  • membrane
  • cytosol
  • Golgi membrane
  • endoplasmic reticulum
  • Golgi apparatus
  • chromatin
  • nucleoplasm

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • identical protein binding
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • protein heterodimerization activity
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II regulatory region sequence-specific DNA binding
  • transcription regulatory region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
  • sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity
  • enzyme binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.