DDX54 Gene Summary [Human]

This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The nucleolar protein encoded by this gene interacts in a hormone-dependent manner with nuclear receptors, and represses their transcriptional activity. Alternative splice variants that encode different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
DDX54
Official Name
DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
Ensembl ID
ENSG00000123064
Bio databases IDs NCBI: 79039 Ensembl: ENSG00000123064
Aliases DEAD-box helicase 54, apoptosis related protein 5, DEAD box polypeptide, 97kD
Synonyms 2410015A15Rik, DEAD-box helicase 54, DP97, RGD1562539
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DDX54 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • transcription co-repressor
  • helicase superfamily c-terminal domain
  • DEAD/DEAH box helicase
  • receptor binding
  • estrogen receptor binding
  • Helicase conserved C-terminal domain
  • RNA helicase
  • DBP10CT (NUC160) domain
  • Type III restriction enzyme, res subunit
  • N-terminal helicase domain of the DEAD-box helicase superfamily
  • DEAD-like helicases superfamily
  • P-loop containing Nucleoside Triphosphate Hydrolases

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • liver cancer
  • lung cancer
  • colon cancer
  • pancreatic carcinoma
  • pancreatic epithelial cancer
regulated by
  • beta-estradiol
  • trans-hydroxytamoxifen
  • promegestone
  • dihydrotestosterone
  • mifepristone
  • CST5
  • ESR1
  • IgM
  • IgG1
  • DDX54
regulates
role in cell
  • processing in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Golgi Apparatus
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DDX54 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • RNA metabolic process
  • negative regulation of transcription, DNA-dependent
  • RNA processing
  • rRNA processing
  • intracellular estrogen receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • membrane
  • Golgi apparatus
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • RNA binding
  • RNA helicase activity
  • transcription corepressor activity
  • estrogen receptor binding
  • receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.