CCNT1 Gene Summary [Human]

This gene encodes a member of the highly conserved cyclin C subfamily. The encoded protein tightly associates with cyclin-dependent kinase 9, and is a major subunit of positive transcription elongation factor b (p-TEFb). In humans, there are multiple forms of positive transcription elongation factor b, which may include one of several different cyclins along with cyclin-dependent kinase 9. The complex containing the encoded cyclin and cyclin-dependent kinase 9 acts as a cofactor of human immunodeficiency virus type 1 (HIV-1) Tat protein, and is both necessary and sufficient for full activation of viral transcription. This cyclin and its kinase partner are also involved in triggering transcript elongation through phosphorylation of the carboxy-terminal domain of the largest RNA polymerase II subunit. Overexpression of this gene is implicated in tumor growth. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2013]

Details

Type
Protein Coding
Official Symbol
CCNT1
Official Name
cyclin T1 [Source:HGNC Symbol;Acc:HGNC:1599]
Ensembl ID
ENSG00000129315
Bio databases IDs NCBI: 904 Ensembl: ENSG00000129315
Aliases cyclin T1
Synonyms 2810478G24RIK, CCNT, Cyclin T, cyclin T1, CYCT1, HIVE1, LOC103692976, LOC144438
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CCNT1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • cyclin N-terminal domain
  • transcription regulator
  • cyclin box
  • Cyclin box fold superfamily
  • protein binding activity, bridging
  • transcription factor binding
  • chromatin binding
  • coiled-coil domain
  • domain present in cyclins, TFIIB and Retinoblastoma
  • serine-rich region
  • TAR binding domain
  • Cyclin, N-terminal domain
  • Tat-TAR recognition motif
  • snRNA binding
  • protein kinase binding
  • nucleic acid binding
  • enzyme binding
  • protein binding
  • sequence-specific DNA binding
  • cyclin-dependent protein kinase regulator
  • DNA binding
  • cyclin-CDK binding domain
  • protein kinase activator
  • PEST domain
  • double-stranded DNA binding
  • Tat binding domain
  • histidine-rich region
  • TAT recognition domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • infection by HIV-1
regulated by
  • C1QBP
  • amphetamine
  • beta-estradiol
  • adenosine triphosphate
  • B lymphocytes
  • plasma cells
  • calcineurin A
  • ESR1
  • PRKCD
  • trans-hydroxytamoxifen
regulates
role in cell
  • expression in
  • apoptosis
  • differentiation
  • transmembrane potential
  • production in
  • replication in
  • morphology
  • cellular infiltration by
  • Clathrin mediated endocytosis by
  • recruitment in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • cytosol
  • nuclear foci
  • nucleoplasm
  • nucleoli
  • nuclear bodies
  • nuclear speckles

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CCNT1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of transcription elongation from RNA polymerase II promoter
  • positive regulation by host of viral transcription
  • cell division
  • transcription from RNA polymerase II promoter
  • response to xenobiotic stimulus
  • positive regulation of transcription from RNA polymerase II promoter
  • positive regulation of transcription elongation, DNA-dependent
  • regulation of cyclin-dependent protein kinase activity
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • dimeric positive transcription elongation factor complex b
  • cytosol
  • positive transcription elongation factor complex b
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA polymerase binding
  • DNA binding
  • protein kinase binding
  • protein binding
  • transcription regulatory region sequence-specific DNA binding
  • chromatin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.