SNX6 Gene Summary [Human]

This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein associates with the long isoform of the leptin receptor, the transforming growth factor-beta family of receptor serine-threonine kinases, and with receptor tyrosine kinases for platelet-derived growth factor, insulin, and epidermal growth factor. This protein may form oligomeric complexes with family member proteins through interactions of both the PX domain and the coiled coil regions of the molecules. Translocation of this protein from the cytoplasm to the nucleus occurs after binding to proviral integration site 1 protein. This gene results in two transcripts encoding two distinct isoforms. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
SNX6
Official Name
sorting nexin 6 [Source:HGNC Symbol;Acc:HGNC:14970]
Ensembl ID
ENSG00000129515
Bio databases IDs NCBI: 58533 Ensembl: ENSG00000129515
Aliases sorting nexin 6
Synonyms 2010006G21Rik, 2610032J07Rik, 2810425K19Rik, MSTP010, sorting nexin 6, TFAF2, TRAF4 ASSOCIATED FACTOR 2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SNX6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • cytoskeletal protein binding
  • Vps5 C terminal like
  • transforming growth factor-beta receptor binding
  • protein homodimerization
  • coiled-coil domain
  • The Phox Homology domain, a phosphoinositide binding module
  • protein binding
  • Bin/Amphiphysin/Rvs domain
  • PX domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • COVID-19
  • Alzheimer disease
  • neonatal late-onset sepsis
  • infection by Listeria monocytogenes EGD-e
regulated by
regulates
role in cell
  • apoptosis
  • expression in
  • accumulation in
  • formation
  • detachment
  • formation in
  • replication in
  • loss in
  • detachment in
  • recovery in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • glutaminergic synapse
  • cell periphery
  • Nucleus
  • endosomes
  • vesicles
  • lysosome
  • cytoplasmic aggregates
  • endosomal membrane
  • early endosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SNX6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription, DNA-dependent
  • negative regulation of epidermal growth factor-activated receptor activity
  • cellular response to epidermal growth factor stimulus
  • regulation of macroautophagy
  • intracellular protein transport
  • retrograde transport, endosome to Golgi
  • negative regulation of transforming growth factor beta receptor signaling pathway
  • negative regulation of neuron apoptotic process

Cellular Component

Where in the cell the gene product is active
  • early endosome membrane
  • nucleus
  • endosome
  • cytoplasm
  • retromer complex, outer shell
  • retromer complex
  • cytosol
  • lysosome

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • protein homodimerization activity
  • dynactin binding
  • phosphatidylinositol binding
  • type I transforming growth factor beta receptor binding

Gene-Specific Assays for Results You Can Trust

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