ARID5B Gene Summary [Human]
This gene encodes a member of the AT-rich interaction domain (ARID) family of DNA binding proteins. The encoded protein forms a histone H3K9Me2 demethylase complex with PHD finger protein 2 and regulates the transcription of target genes involved in adipogenesis and liver development. This gene also plays a role in cell growth and differentiation of B-lymphocyte progenitors, and single nucleotide polymorphisms in this gene are associated with acute lymphoblastic leukemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011]
Details
| Type | Protein Coding |
| Official Symbol | ARID5B |
| Official Name | AT-rich interaction domain 5B [Source:HGNC Symbol;Acc:HGNC:17362] |
| Ensembl ID | ENSG00000150347 |
| Bio databases IDs | |
| Aliases | AT-rich interaction domain 5B |
| Synonyms | 4930580B11, 5430435G07Rik, AT-rich interaction domain 5B, DESRT, DKFZP586N012, Mrf1-like, MRF-2 |
| Species | Human, Homo sapiens |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ARID5B often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- transcription regulator
- transcription co-activator
- double-stranded DNA binding
- nucleic acid binding
- protein binding
- sequence-specific DNA binding
- ARID/BRIGHT DNA binding domain
- DNA binding
- ARID/BRIGHT DNA binding domain family
Top Findings
The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
- rheumatoid arthritis
- non-insulin-dependent diabetes mellitus
- lung adenocarcinoma
- lung adenocarcinoma formation
- acute lymphoblastic leukemia
- hypothyroidism
- glioblastoma
- glioblastoma cancer
- childhood acute lymphoblastic leukemia
- systemic lupus erythematosus
role in cell
- apoptosis
- number
- differentiation
- expression in
- binding in
- proliferation
- development
- production in
- quantity
- migration
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Nucleus
- nucleoplasm
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the human ARID5B gene, providing context for its role in the cell.
Biological Process
Functions and activities the gene product is involved in
- multicellular organism growth
- male gonad development
- post-embryonic development
- palate development
- fat pad development
- platelet-derived growth factor receptor signaling pathway
- cell development
- fat cell differentiation
- muscle organ morphogenesis
- female gonad development
- positive regulation of sequence-specific DNA binding transcription factor activity
- skeletal system morphogenesis
- face morphogenesis
- regulation of transcription from RNA polymerase II promoter
- adipose tissue development
- negative regulation of transcription from RNA polymerase II promoter
- negative regulation of transcription, DNA-dependent
- kidney development
- positive regulation of transcription, DNA-dependent
- liver development
- fibroblast migration
- adrenal gland development
Cellular Component
Where in the cell the gene product is active
- nucleus
- nucleoplasm
Molecular Function
What the gene product does at the molecular level
- DNA binding
- protein binding
- transcription coactivator activity
- transcription regulatory region sequence-specific DNA binding