SEMA3E Gene Summary [Human]

Semaphorins are a large family of conserved secreted and membrane associated proteins which possess a semaphorin (Sema) domain and a PSI domain (found in plexins, semaphorins and integrins) in the N-terminal extracellular portion. Based on sequence and structural similarities, semaphorins are put into eight classes: invertebrates contain classes 1 and 2, viruses have class V, and vertebrates contain classes 3-7. Semaphorins serve as axon guidance ligands via multimeric receptor complexes, some (if not all) containing plexin proteins. This gene encodes a class 4 semaphorin. This gene encodes a class 3 semaphorin. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, May 2010]

Details

Type
Protein Coding
Official Symbol
SEMA3E
Official Name
semaphorin 3E [Source:HGNC Symbol;Acc:HGNC:10727]
Ensembl ID
ENSG00000170381
Bio databases IDs NCBI: 9723 Ensembl: ENSG00000170381
Aliases semaphorin 3E, M-sema H
Synonyms 6430702L12, coll-5, LOC108350656, mKIAA0331, M-SEMAH, M-SemaK, sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E, SEMAH, SEMAPHORIN 3E
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SEMA3E often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • semaphorin domain
  • Plexin repeat
  • semaphorin receptor binding
  • immunoglobulin domain
  • receptor agonist activity
  • protein binding
  • Sema domain
  • Immunoglobulin V-set domain
  • The Sema domain, a protein interacting module, of semaphorins and plexins

Pathways

Biological processes and signaling networks where the SEMA3E gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplasia
  • proliferative diabetic retinopathy
  • myopia
  • nephrosis
  • femoral fracture
  • hypogonadotropic hypogonadism 5
  • airway hyperresponsiveness
  • retinitis pigmentosa
  • vascular dementia
  • CHARGE syndrome
regulated by
role in cell
  • expression in
  • activation in
  • apoptosis
  • binding in
  • phosphorylation in
  • number
  • formation
  • chemorepulsion
  • organization
  • collapse

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SEMA3E gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell shape
  • negative regulation of angiogenesis
  • gonadotrophin-releasing hormone neuronal migration to the hypothalamus
  • negative chemotaxis
  • synapse organization
  • sprouting angiogenesis
  • axon guidance
  • negative regulation of neuron apoptotic process
  • negative regulation of cell-matrix adhesion
  • neural crest cell migration
  • patterning of blood vessels
  • positive regulation of protein kinase B signaling cascade
  • semaphorin-plexin signaling pathway
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • extracellular space
  • extracellular region
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • receptor agonist activity
  • chemorepellent activity
  • semaphorin receptor binding

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