IKZF1 Gene Summary [Human]

This gene encodes a transcription factor that belongs to the family of zinc-finger DNA-binding proteins associated with chromatin remodeling. The expression of this protein is restricted to the fetal and adult hemo-lymphopoietic system, and it functions as a regulator of lymphocyte differentiation. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene. Most isoforms share a common C-terminal domain, which contains two zinc finger motifs that are required for hetero- or homo-dimerization, and for interactions with other proteins. The isoforms, however, differ in the number of N-terminal zinc finger motifs that bind DNA and in nuclear localization signal presence, resulting in members with and without DNA-binding properties. Only a few isoforms contain the requisite three or more N-terminal zinc motifs that confer high affinity binding to a specific core DNA sequence element in the promoters of target genes. The non-DNA-binding isoforms are largely found in the cytoplasm, and are thought to function as dominant-negative factors. Overexpression of some dominant-negative isoforms have been associated with B-cell malignancies, such as acute lymphoblastic leukemia (ALL). [provided by RefSeq, May 2014]

Details

Type
Protein Coding
Official Symbol
IKZF1
Official Name
IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]
Ensembl ID
ENSG00000185811
Bio databases IDs NCBI: 10320 Ensembl: ENSG00000185811
Aliases IKAROS family zinc finger 1, protein phosphatase 1, regulatory subunit 92
Synonyms 5832432G11Rik, CVID13, hlk-1, Hs.54452, Ik, Ik1, IKAROS, IKAROS family zinc finger 1, LOC100132224, LOC389490, LYF1, mKIAA4227, PPP1R92, PRO0758, RGD1562979, Zfpn1a1, ZNFN1A1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human IKZF1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Zinc finger, C2H2 type
  • CtBP binding domain
  • transcription regulator
  • DNA binding domain
  • nucleic acid binding
  • C2H2-type zinc-finger domain
  • linker domain
  • protein domain specific binding
  • protein binding
  • sequence-specific DNA binding
  • identical protein binding
  • DNA binding
  • transcription repression domain
  • double-stranded DNA binding
  • Zinc-finger double domain
  • zinc finger domain
  • poly-pyrimidine tract binding
  • transcription factor activity

Pathways

Biological processes and signaling networks where the IKZF1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • rheumatoid arthritis
  • cancer
  • respiratory disorder
  • lymphoma
  • systemic lupus erythematosus
  • hyperplasia
  • insulin-dependent diabetes mellitus
  • anemia
  • diabetic nephropathy
  • androgenic alopecia
regulated by
  • lipopolysaccharide
  • AGT
  • ionomycin
  • tetradecanoylphorbol acetate
  • T lymphocytes
  • EZH2
  • pomalidomide
  • FOXO1
  • hydrogen peroxide
  • iberdomide
role in cell
  • expression in
  • apoptosis
  • activation in
  • cell death
  • production in
  • proliferation
  • morphology
  • quantity
  • binding in
  • transcription in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • heterochromatin
  • Cytoplasm
  • cytosol
  • nuclear foci
  • nucleoplasm
  • nuclear speckles
  • chromatin structures
  • centromeres
  • centromeric heterochromatin
  • pericentric heterochromatin
  • toroidal chromatin structures
  • cytoplasmic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human IKZF1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • erythrocyte differentiation
  • negative regulation of transcription, DNA-dependent
  • mesoderm development
  • lymphocyte differentiation
  • chromatin organization
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytosol
  • macromolecular complex
  • centromeric heterochromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein domain specific binding
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • metal ion binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.