Ikzf1 Gene Summary [Mouse]

The protein encoded by this gene belongs to a family of transcription factors that are characterized by a set of four DNA-binding zinc fingers at the N-terminus and two C-terminal zinc fingers involved in protein dimerization. It is regulated by both epigenetic and transcription factors. This protein is a transcriptional regulator of hematopoietic cell development and homeostasis. In addition, it is required to confer temporal competence to retinal progenitor cells during embryogenesis, demonstrating an essential function in nervous system development. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2014]

Details

Type
Protein Coding
Official Symbol
Ikzf1
Official Name
IKAROS family zinc finger 1 [Source:MGI Symbol;Acc:MGI:1342540]
Ensembl ID
ENSMUSG00000018654
Bio databases IDs NCBI: 22778 Ensembl: ENSMUSG00000018654
Aliases IKAROS family zinc finger 1
Synonyms 5832432G11Rik, CVID13, hlk-1, Hs.54452, Ik, Ik1, IKAROS, IKAROS family zinc finger 1, LOC100132224, LOC389490, LYF1, mKIAA4227, PPP1R92, PRO0758, RGD1562979, Zfpn1a1, ZNFN1A1
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Ikzf1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Zinc finger, C2H2 type
  • CtBP binding domain
  • transcription regulator
  • DNA binding domain
  • nucleic acid binding
  • C2H2-type zinc-finger domain
  • linker domain
  • protein domain specific binding
  • protein binding
  • sequence-specific DNA binding
  • identical protein binding
  • DNA binding
  • transcription repression domain
  • double-stranded DNA binding
  • Zinc-finger double domain
  • zinc finger domain
  • poly-pyrimidine tract binding
  • transcription factor activity

Pathways

Biological processes and signaling networks where the Ikzf1 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • rheumatoid arthritis
  • cancer
  • respiratory disorder
  • lymphoma
  • systemic lupus erythematosus
  • hyperplasia
  • insulin-dependent diabetes mellitus
  • anemia
  • diabetic nephropathy
  • androgenic alopecia
regulated by
  • lipopolysaccharide
  • AGT
  • ionomycin
  • tetradecanoylphorbol acetate
  • T lymphocytes
  • EZH2
  • pomalidomide
  • FOXO1
  • hydrogen peroxide
  • iberdomide
role in cell
  • expression in
  • apoptosis
  • activation in
  • cell death
  • production in
  • proliferation
  • morphology
  • quantity
  • binding in
  • transcription in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • heterochromatin
  • Cytoplasm
  • cytosol
  • nuclear foci
  • nucleoplasm
  • nuclear speckles
  • chromatin structures
  • centromeres
  • centromeric heterochromatin
  • pericentric heterochromatin
  • toroidal chromatin structures
  • cytoplasmic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Ikzf1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • erythrocyte differentiation
  • negative regulation of transcription, DNA-dependent
  • mesoderm development
  • lymphocyte differentiation
  • chromatin organization
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytosol
  • macromolecular complex
  • centromeric heterochromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein domain specific binding
  • sequence-specific DNA binding transcription factor activity
  • protein binding
  • metal ion binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.