DDX17 Gene Summary [Human]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and splicesosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which is an ATPase activated by a variety of RNA species, but not by dsDNA. This protein, and that encoded by DDX5 gene, are more closely related to each other than to any other member of the DEAD box family. This gene can encode multiple isoforms due to both alternative splicing and the use of alternative translation initiation codons, including a non-AUG (CUG) start codon. [provided by RefSeq, Apr 2011]

Details

Type
Protein Coding
Official Symbol
DDX17
Official Name
DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]
Ensembl ID
ENSG00000100201
Bio databases IDs NCBI: 10521 Ensembl: ENSG00000100201
Aliases DEAD-box helicase 17
Synonyms 2610007K22RIK, A430025E01Rik, AA521056, DEAD-box helicase 17, DEAD-box protein p72, DEAD/H box RNA helicase p72, Gm926, P72, RH70
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DDX17 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • acetylation site
  • transcription co-activator
  • DEAD/DEAH box helicase
  • helicase superfamily c-terminal domain
  • chromatin binding
  • enzyme
  • protein binding
  • Helicase conserved C-terminal domain
  • RNA helicase
  • RNA dependent ATPase
  • DNA binding
  • RNA binding
  • N-terminal helicase domain of the DEAD-box helicase superfamily
  • DEAD-like helicases superfamily
  • P-loop containing Nucleoside Triphosphate Hydrolases

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • epithelial cancer
  • organismal death
  • metastasis
  • neoplasia
  • cholecystitis
  • tubulovillous adenoma
  • mixed neoplasia
  • adenoma formation
  • gastrointestinal neoplasia
  • breast cancer
regulated by
  • MTDH
  • lipopolysaccharide
  • beta-estradiol
  • YAP1
  • TP53
  • THRAP3
  • MYOPARR
  • Hbx
  • rebemadlin
  • EAhy926 cells
regulates
role in cell
  • expression in
  • activation in
  • apoptosis
  • cell cycle progression
  • phosphorylation in
  • invasion by
  • migration
  • replication in
  • growth
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • cytosol
  • spliceosomes
  • nucleoplasm
  • nucleoli
  • interchromatin granule clusters
  • nuclear speckles
  • paraspeckle-like structures

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DDX17 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • myoblast differentiation
  • RNA processing
  • rRNA processing
  • positive regulation of transcription from RNA polymerase II promoter
  • immune system process
  • regulation of transcription from RNA polymerase II promoter
  • regulation of alternative nuclear mRNA splicing, via spliceosome
  • alternative nuclear mRNA splicing, via spliceosome
  • defense response to virus
  • epithelial to mesenchymal transition
  • gene silencing by RNA
  • androgen receptor signaling pathway
  • intracellular estrogen receptor signaling pathway
  • regulation of skeletal muscle cell differentiation
  • miRNA metabolic process

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • nuclear speck
  • membrane
  • cytosol
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • RNA binding
  • protein binding
  • transcription coactivator activity
  • RNA helicase activity
  • RNA-dependent ATPase activity
  • ribonucleoprotein complex binding
  • mRNA 3'-UTR binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.