PTPRT Gene Summary [Human]

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem intracellular catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP (MAM) domain, Ig-like and fibronectin type III-like repeats. The protein domain structure and the expression pattern of the mouse counterpart of this PTP suggest its roles in both signal transduction and cellular adhesion in the central nervous system. Two alternatively spliced transcript variants of this gene, which encode distinct proteins, have been reported. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
PTPRT
Official Name
protein tyrosine phosphatase receptor type T [Source:HGNC Symbol;Acc:HGNC:9682]
Ensembl ID
ENSG00000196090
Bio databases IDs NCBI: 11122 Ensembl: ENSG00000196090
Aliases protein tyrosine phosphatase receptor type T
Synonyms LOC680887, LOC680897, mKIAA0283, mRPTPrho, protein tyrosine phosphatase receptor type T, protein tyrosine phosphatase, receptor type, T, RPTPmam4, RPTP-rfo, RPTP-rho, R-PTP-T
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PTPRT often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • alpha-catenin binding
  • protein-tyrosine-phoshatase
  • Protein tyrosine phosphatase, catalytic domain
  • transcription factor binding
  • PTP_DSP_cys
  • Fibronectin type 3 domain
  • Protein tyrosine phosphatase, catalytic domain motif
  • Protein tyrosine phosphatase, catalytic domain, undefined specificity
  • Protein-tyrosine phosphatase
  • phosphatase
  • intracellular domain
  • cadherin binding
  • MAM domain, meprin/A5/mu
  • thiolester hydrolase
  • beta-catenin binding
  • actinin binding
  • immunoglobulin domain
  • protein phosphatase binding
  • protein binding
  • phosphatase domain
  • Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
  • gamma-catenin binding
  • FN3
  • transmembrane receptor protein tyrosine phosphatase
  • protein homodimerization

Pathways

Biological processes and signaling networks where the PTPRT gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • acute myeloid leukemia
  • venous thromboembolism
  • COVID-19
  • epithelial neoplasia
  • benign neoplasia
  • neoplasia
  • head and neck squamous cell carcinoma
  • head and neck squamous cell cancer
  • breast cancer
  • androgenic alopecia
regulated by
regulates
role in cell
  • accumulation in
  • cell death
  • expression in
  • phosphorylation in
  • migration
  • proliferation
  • survival
  • adhesion
  • organization
  • invasion by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • pH resistant lipid raft fraction
  • glutaminergic synapse
  • cell surface
  • cellular membrane
  • synaptic membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PTPRT gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cellular response to interleukin-6
  • regulation of synapse organization
  • signal transduction
  • protein dephosphorylation
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • cell adhesion
  • homophilic cell adhesion
  • peptidyl-tyrosine dephosphorylation
  • negative regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • membrane
  • plasma membrane
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • protein phosphatase binding
  • protein homodimerization activity
  • alpha-actinin binding
  • beta-catenin binding
  • transmembrane receptor protein tyrosine phosphatase activity
  • alpha-catenin binding
  • delta-catenin binding
  • gamma-catenin binding
  • protein binding
  • protein tyrosine phosphatase activity
  • cadherin binding
  • thiolester hydrolase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.