DHX16 Gene Summary [Human]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which is a functional homolog of fission yeast Prp8 protein involved in cell cycle progression. This gene is mapped to the MHC region on chromosome 6p21.3, a region where many malignant, genetic and autoimmune disease genes are linked. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2018]

Details

Type
Protein Coding
Official Symbol
DHX16
Official Name
DEAH-box helicase 16 [Source:HGNC Symbol;Acc:HGNC:2739]
Ensembl ID
ENSG00000204560
Bio databases IDs NCBI: 8449 Ensembl: ENSG00000204560
Aliases DEAH-box helicase 16, pre-mRNA processing factor 2
Synonyms 2410006N22Rik, DBP2, DDX16, DEAH-box helicase 16, KIAA0577, mKIAA0577, NMOAS, PRO2014, Prp2, PRP8, PRPF2
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DHX16 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Helicase associated domain (HA2)
  • Oligonucleotide/oligosaccharide-binding (OB)-fold
  • signaling receptor activity
  • DEAD/DEAH box helicase
  • helicase superfamily c-terminal domain
  • ubiquitin binding
  • enzyme
  • protein binding
  • Helicase conserved C-terminal domain
  • RNA helicase
  • Helicase associated domain (HA2) Add an annotation
  • N-terminal helicase domain of the DEAD-box helicase superfamily
  • DEAD-like helicases superfamily
  • P-loop containing Nucleoside Triphosphate Hydrolases

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • liver cancer
  • neuromuscular disease and ocular or auditory anomalies with or without seizures
  • Waldenström macroglobulinemia
  • herpes zoster
  • lung cancer
  • colon cancer
regulated by
role in cell
  • splicing by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • spliceosomes
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DHX16 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • RNA splicing
  • nuclear mRNA splicing, via spliceosome

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • spliceosomal complex
  • U2-type precatalytic spliceosome
  • intracellular
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • protein binding
  • RNA binding
  • ubiquitin binding
  • RNA helicase activity
  • helicase activity
  • binding, bridging

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.