ABCF1 Gene Summary [Human]

The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the GCN20 subfamily. Unlike other members of the superfamily, this protein lacks the transmembrane domains which are characteristic of most ABC transporters. This protein may be regulated by tumor necrosis factor-alpha and play a role in enhancement of protein synthesis and the inflammation process. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ABCF1
Official Name
ATP binding cassette subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:70]
Ensembl ID
ENSG00000204574
Bio databases IDs NCBI: 23 Ensembl: ENSG00000204574
Aliases ATP binding cassette subfamily F member 1
Synonyms ABC27, ABC50, ATP binding cassette subfamily F member 1, ATP-binding cassette, sub-family F member 1, AU041969, D17Wsu166e, GCN20
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ABCF1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • nucleic acid binding translation factor
  • FeS assembly ATPase SufC
  • proposed F420-0 ABC transporter, ATP-binding protein
  • walker type B motif
  • translation activator
  • phosphonate ABC transporter, ATP-binding protein
  • walker type A motif
  • ATP binding
  • protein binding
  • cell division ATP-binding protein FtsE
  • heme ABC exporter, ATP-binding protein CcmA
  • nucleotide-binding domain
  • ATP-binding cassette protein, ChvD family
  • ribosome binding
  • methyl coenzyme M reductase system, component A2
  • phosphonate C-P lyase system protein PhnL
  • nickel import ATP-binding protein NikE
  • ABC transporter
  • P-loop containing Nucleoside Triphosphate Hydrolases
  • transporter
  • ATPases associated with a variety of cellular activities

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • major depression
  • breast carcinoma
regulated by
regulates
  • reporter mRNA
role in cell
  • phagocytosis
  • phagocytosis by
  • translation in
  • replication in
  • synthesis in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • ribosome
  • Nucleus
  • cytosol
  • nucleoplasm
  • nuclear envelope

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ABCF1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • inflammatory response
  • translation

Cellular Component

Where in the cell the gene product is active
  • nuclear envelope
  • membrane
  • cytosol
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • protein binding
  • RNA binding
  • translation factor activity, nucleic acid binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.