Foxn1 Gene Summary [Mouse]

The protein encoded by this gene is part of the forkhead family or "winged-helix" transcription factors that are important in developmental processes, immune system regulation, metabolism, cancer and aging. This gene family has over 100 members, subdivided into classes (A-Q) based on phylogeny. The encoded protein is proposed to regulate development of the thymus and differentiation of keratinocytes. Mutations in this gene cause severe primary T-cell immunodeficiency and congenital alopecia. In mouse mutations of this gene underlie the phenotype of the nude mouse, which has been widely used as a model system in oncology, immunology, dermatology, and transplantation studies. In humans mutations in this gene have been correlated with T-cell immunodeficiency, the skin disorder congenital alopecia, and nail dystrophy. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Apr 2013]

Details

Type
Protein Coding
Official Symbol
Foxn1
Official Name
forkhead box N1 [Source:MGI Symbol;Acc:MGI:102949]
Ensembl ID
ENSMUSG00000002057
Bio databases IDs NCBI: 15218 Ensembl: ENSMUSG00000002057
Aliases forkhead box N1
Synonyms D11Bhm185e, Fkh19, FKHL20, forkhead box N1, HFH-11, nu, nude, Rnu, RONU, TIDAND, TLIND, WHN
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Foxn1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • FH_FOX
  • protein binding
  • sequence-specific DNA binding
  • Forkhead domain
  • FORKHEAD

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • common variable immunodeficiency with predominant immunoregulatory T-cell disorders
  • COVID-19
  • autosomal dominant infantile T-cell lymphopenia with or without nail dystrophy
  • autosomal dominant infantile T-cell lymphopenia with nail dystrophy
  • congenital alopecia
  • immunodeficiency
  • autism
  • alopecia
  • T-cell immunodeficiency with thymic aplasia
  • severe combined immunodeficiency
regulates
role in cell
  • expression in
  • differentiation
  • transactivation in
  • expansion
  • quantity
  • decline
  • production
  • disruption
  • homeostasis
  • hematopoiesis

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cell cortex
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Foxn1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • epidermis development
  • T cell lineage commitment
  • blood vessel morphogenesis
  • defense response
  • positive regulation of transcription from RNA polymerase II promoter
  • T cell homeostasis
  • regulation of transcription from RNA polymerase II promoter
  • organ morphogenesis
  • keratinocyte differentiation
  • hair follicle development
  • positive regulation of epithelial cell differentiation
  • nail development
  • positive regulation of hair follicle development

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatin

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • transcription regulatory region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.