Rp1 Gene Summary [Rat]

This gene encodes a member of the doublecortin family. The protein encoded by this gene contains two doublecortin domains, which bind microtubules and regulate microtubule polymerization. The encoded protein is a photoreceptor microtubule-associated protein and is required for correct stacking of outer segment disc. This protein and the RP1L1 protein, another retinal-specific protein, play essential and synergistic roles in affecting photosensitivity and outer segment morphogenesis of rod photoreceptors. Because of its response to in vivo retinal oxygen levels, this protein was initially named ORP1 (oxygen-regulated protein-1). This protein was subsequently designated RP1 (retinitis pigmentosa 1) when it was found that mutations in this gene cause autosomal dominant retinitis pigmentosa. Mutations in this gene also cause autosomal recessive retinitis pigmentosa. [provided by RefSeq, Sep 2010]

Details

Type
Protein Coding
Official Symbol
Rp1
Official Name
RP1, axonemal microtubule associated [Source:RGD Symbol;Acc:1596713]
Ensembl ID
ENSRNOG00000008807
Bio databases IDs NCBI: 681377 Ensembl: ENSRNOG00000008807
Aliases RP1, axonemal microtubule associated
Synonyms Dcdc3, DCDC4A, Gm38717, LOC100128419, LOC100364170, LOC102552996, LOC107984125, LOC684060, mG145, ORP1, retinitis pigmentosa 1 (human), RGD1560182, RP1 axonemal microtubule associated, RP1, axonemal microtubule associated, RP1H
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Rp1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • microtubule binding
  • beta-trefoil_FGF
  • Doublecortin
  • Ubl1_cv_Nsp3_N-like
  • PLAT
  • protein binding
  • Lipoxygenase homology 2 (beta barrel) domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • retinitis pigmentosa type 1
  • retinitis pigmentosa
  • cerebral aneurysm
  • retinal dystrophy
  • autosomal dominant retinitis pigmentosa
  • autosomal recessive retinitis pigmentosa
  • congenital cataract
  • schizophrenia
  • Crohn disease
  • lung carcinoma
regulated by
regulates
role in cell
  • formation
  • morphology
  • quantity
  • electrophysiology
  • development
  • assembly
  • elongation
  • response by
  • abnormal morphology
  • acetylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • ciliary tip
  • non-motile cilium
  • cilia
  • microtubules
  • axonemes
  • connecting cilia
  • nucleoli
  • neurites
  • photoreceptor outer segments
  • photoreceptor inner segments

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Rp1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cellular response to light stimulus
  • phototransduction, visible light
  • retina development in camera-type eye
  • photoreceptor cell maintenance
  • photoreceptor cell development
  • photoreceptor cell outer segment organization
  • axoneme assembly
  • retinal cone cell development
  • visual perception
  • intracellular signal transduction
  • retinal rod cell development

Cellular Component

Where in the cell the gene product is active
  • photoreceptor connecting cilium
  • photoreceptor inner segment
  • microtubule associated complex
  • axoneme
  • photoreceptor outer segment
  • microtubule

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

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