Col20a1 Gene Summary [Rat]
Predicted to be located in endoplasmic reticulum lumen and extracellular region. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
Details
| Type | Protein Coding |
| Official Symbol | Col20a1 |
| Official Name | collagen type XX alpha 1 chain [Source:RGD Symbol;Acc:1563901] |
| Ensembl ID | ENSRNOG00000010326 |
| Bio databases IDs | |
| Aliases | collagen type XX alpha 1 chain |
| Synonyms | 1700051I12RIK, collagen, type XX, alpha 1, collagen type XX alpha 1 chain, collagen, type XX, α 1, collagen type XX α 1 chain, RGD1563901 |
| Species | Rat, Rattus norvegicus |
| Orthologies |
Protein Domains
A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Col20a1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
- von Willebrand factor (vWF) type A domain
- LamG
- FN3
- vWFA
- Collagen triple helix repeat (20 copies)
- protein binding
- von Willebrand factor type A domain
- Fibronectin type 3 domain
Pathways
Biological processes and signaling networks where the Col20a1 gene in rat plays a role, providing insight into its function and relevance in health or disease.
Subcellular Expression
Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
- Extracellular Space
- endoplasmic reticulum lumen
- extracellular matrix
Gene Ontology Annotations
Describes the biological processes, cellular components, and molecular functions associated with the rat Col20a1 gene, providing context for its role in the cell.
Cellular Component
Where in the cell the gene product is active
- endoplasmic reticulum lumen
- collagen
- extracellular region