Cd4 Gene Summary [Rat]

This gene encodes the CD4 membrane glycoprotein of T lymphocytes. The CD4 antigen acts as a coreceptor with the T-cell receptor on the T lymphocyte to recognize antigens displayed by an antigen presenting cell in the context of class II MHC molecules. The CD4 antigen is also a primary receptor for entry of the human immunodeficiency virus through interactions with the HIV Env gp120 subunit. This gene is expressed not only in T lymphocytes, but also in B cells, macrophages, granulocytes, as well as in various regions of the brain. The protein functions to initiate or augment the early phase of T-cell activation, and may function as an important mediator of indirect neuronal damage in infectious and immune-mediated diseases of the central nervous system. Multiple alternatively spliced transcript variants encoding different isoforms have been identified in this gene. [provided by RefSeq, May 2020]

Details

Type
Protein Coding
Official Symbol
Cd4
Official Name
Cd4 molecule [Source:RGD Symbol;Acc:2306]
Ensembl ID
ENSRNOG00000016294
Bio databases IDs NCBI: 24932 Ensembl: ENSRNOG00000016294
Aliases Cd4 molecule
Synonyms CD4 ANTIGEN, CD4 molecule, CD4mut, CD4 Receptor, CD4v4, IMD79, L3T4, Leu-3, Ly-4, OKT4D, p55, T4, W3/25
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Cd4 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • MHC class II protein binding
  • viral receptor
  • interleukin-16 binding
  • interleukin-16 receptor
  • V1 region
  • TM_EGFR-like
  • signal peptide
  • V domain
  • identical protein binding
  • Ig-like V domain
  • zinc ion binding
  • cytoplasmic domain
  • Immunoglobulin like
  • intracellular domain
  • immunoglobulin-like protein domain
  • tail domain
  • CD4, extracellular
  • V2 domain
  • transmembrane receptor
  • Immunoglobulin V-set domain
  • coreceptor
  • extracellular domain
  • palmitoylation site
  • lipid binding
  • protein kinase binding
  • signaling receptor activity
  • T cell CD4 receptor C terminal region
  • Immunoglobulin V-Type
  • immunoglobulin domain
  • ectodomain
  • Cdr3 domain
  • Immunoglobulin I-set domain
  • enzyme binding
  • lymphocyte-specific protein tyrosine kinase binding domain
  • protein binding
  • receptor binding
  • immunoglobulin binding
  • endocytic signal motif
  • binding protein
  • transmembrane domain
  • protein homodimerization
  • cytosolic tail domain
  • complementarity-determining region 3-like loop
  • Cys-x-cys-pro motif

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • neoplasia
  • hepatocellular carcinoma
  • liver cancer
  • epithelial cancer
  • experimental autoimmune encephalomyelitis
  • obesity
  • sepsis
  • infection
  • fibrosis
  • Sézary syndrome
regulated by
regulates
  • NOS2
  • p38 MAPK
  • SYK
  • DNA endogenous promoter
  • JNK
  • NFkB (complex)
  • LYN
  • Ca2+
  • ERK1/2
  • LCK
role in cell
  • accumulation in
  • activation
  • proliferation
  • cell death
  • binding in
  • survival
  • production in
  • activation in
  • volume
  • quantity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • detergent-insoluble membrane fraction
  • plasma membrane fraction
  • raft fractions
  • detergent-insoluble fractions
  • membrane fraction
  • cytoskeletal membrane fractions
  • GM1-enriched lipid raft
  • endocytic vesicle membrane
  • cell surface
  • cell periphery
  • intracellular space
  • perinuclear region
  • cellular membrane
  • Endoplasmic Reticulum
  • immunological synapses
  • granules
  • cytoplasmic face of plasma membrane
  • endoplasmic reticulum membrane
  • endoplasmic reticulum lumen
  • plasma membrane extracellular face
  • plasma membrane projections
  • early endosomes
  • transport vesicles
  • membrane rafts
  • plasma
  • detergent-soluble fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Cd4 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral entry into host cell
  • T cell activation
  • positive regulation of I-kappaB kinase/NF-kappaB cascade
  • positive regulation of viral entry into host cell
  • cell adhesion
  • positive regulation of calcium-mediated signaling
  • maintenance of protein location in cell
  • positive regulation of T cell activation
  • immune response
  • positive regulation of transcription, DNA-dependent
  • positive regulation of kinase activity
  • regulation of calcium ion transport
  • calcium-mediated signaling
  • positive regulation of peptidyl-tyrosine phosphorylation
  • macrophage differentiation
  • positive regulation of interleukin-2 production
  • helper T cell enhancement of adaptive immune response
  • defense response to Gram-negative bacterium
  • signal transduction
  • adaptive immune response
  • transmembrane receptor protein tyrosine kinase signaling pathway
  • cell surface receptor signaling pathway
  • T cell selection
  • positive regulation of MAPK cascade
  • enzyme linked receptor protein signaling pathway
  • positive regulation of monocyte differentiation
  • T cell differentiation
  • cellular response to granulocyte macrophage colony-stimulating factor stimulus
  • positive regulation of protein kinase activity
  • positive regulation of ERK1 and ERK2 cascade
  • positive regulation of protein phosphorylation
  • interleukin-15-mediated signaling pathway
  • regulation of T cell activation

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • endoplasmic reticulum lumen
  • early endosome
  • clathrin-coated endocytic vesicle membrane
  • membrane raft
  • external side of plasma membrane
  • T cell receptor complex
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein kinase binding
  • coreceptor activity
  • identical protein binding
  • zinc ion binding
  • protein homodimerization activity
  • signaling receptor activity
  • interleukin-16 binding
  • interleukin-16 receptor activity
  • lipid binding
  • MHC class II protein binding
  • MHC class II protein complex binding
  • extracellular matrix structural constituent
  • protein binding
  • transmembrane signaling receptor activity
  • viral receptor activity
  • enzyme binding

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