CDH16

CDH16 Gene Summary

This gene is a member of the cadherin superfamily, genes encoding calcium-dependent, membrane-associated glycoproteins. Mapped to a previously identified cluster of cadherin genes on chromosome 16q22.1, the gene localizes with superfamily members CDH1, CDH3, CDH5, CDH8 and CDH11. The protein consists of an extracellular domain containing 6 cadherin domains, a transmembrane region and a truncated cytoplasmic domain but lacks the prosequence and tripeptide HAV adhesion recognition sequence typical of most classical cadherins. Expression is exclusively in kidney, where the protein functions as the principal mediator of homotypic cellular recognition, playing a role in the morphogenic direction of tissue development. Alternatively spliced transcript variants encoding distinct isoforms have been identified. [provided by RefSeq, Mar 2011]

Details

Type
Protein Coding
Official Symbol
CDH16
Official Name
cadherin 16 [Source:HGNC Symbol;Acc:HGNC:1755]
Ensembl ID
ENSG00000166589
Bio databases IDs NCBI: 1014 Ensembl: ENSG00000166589
Aliases cadherin 16
Synonyms
cadherin 16,KSP-cadherin
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Cadherin repeat-like domain
  • enzyme
  • protein binding

Pathways

Biological processes and signaling networks where the CDH16 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • PTPRF
  • FGFR1
  • PTPRS
  • NEK6
  • TFB2M
  • DCHS1
  • RPL14
  • PCDHGA11
  • EGFR
  • DCBLD1
disease
  • thyroid carcinoma
  • epithelial thyroid cancer
  • renal cell carcinoma
  • renal cell cancer
  • Wilms tumor
  • Wilms tumorigenesis
  • renal failure
  • anaplastic thyroid carcinoma
  • anaplastic thyroid cancer
regulated by
  • dexamethasone
  • CTNNB1
  • progesterone
  • HOXA10
  • CBX3
  • decitabine
  • MirBART2
  • CDCA8
  • Caco2 cells
  • EHMT1
regulates
  • cyclin A
  • MTOR
  • CDC2
  • CCND1
  • ERK1/2
  • RPS6
  • CDK4
  • AKT1
  • RPS6KA1
  • MAP2K1/2
role in cell
  • proliferation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cellular membrane
  • basolateral membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the CDH16 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • calcium-dependent cell-cell adhesion
  • cell adhesion
  • homophilic cell adhesion

CELLULAR COMPONENT

Where in the cell the gene product is active
  • extracellular vesicular exosome
  • basolateral plasma membrane
  • plasma membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • calcium ion binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.