ATP6V0A1

ATP6V0A1 Gene Summary

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This gene encodes one of three A subunit proteins and the encoded protein is associated with clathrin-coated vesicles. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ATP6V0A1
Official Name
ATPase H+ transporting V0 subunit a1 [Source:HGNC Symbol;Acc:HGNC:865]
Ensembl ID
ENSG00000033627
Bio databases IDs NCBI: 535 Ensembl: ENSG00000033627
Aliases ATPase H+ transporting V0 subunit a1, vacuolar proton pump subunit 1, V-ATPase subunit a1
Synonyms
a1,ATP6a1,ATP6N1,ATP6N1A,ATPase, H+ transporting, lysosomal V0 subunit A1,ATPase H+ transporting V0 subunit a1,Atpv0a1,DEE104,NEDEBA,Stv1,Vacuolar proton pump subunit 1,V-ATPase subunit a1,V-ATPase V0-a1,Vph1,VPP1
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATPase binding
  • H+-transporting two-sector ATPase
  • protein binding
  • V-type ATPase 116kDa subunit family
  • transporter

Pathways

Biological processes and signaling networks where the ATP6V0A1 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • ESR2
  • MUC1
  • PSEN1
  • WDFY4
  • MAPT
  • NPC1
  • ATP6V1B1
  • ATP6V1A
  • PLEKHA4
  • ATP6V0D2
disease
  • developmental and epileptic encephalopathy type 104
  • neurodevelopmental disorder with epilepsy and brain atrophy
  • hereditary disorder
  • developmental epileptic encephalopathy
  • infection by HIV-1
  • infection by Dengue virus 2
  • productive infection by HIV-1
regulated by
  • APP
  • LEF1
  • ATP6V0A1
  • Immunoglobulin
  • BCR (complex)
  • ATP6V0A4
  • PSEN1
  • regulatory T lymphocytes
  • IL10
  • ASPSCR1-TFE3
regulates
  • RPS6
  • phosphatidylinositol 3,5-bisphosphate
  • ATP6V0A1
  • CTSD
  • TFRC
  • phosphatidylinositol triphosphate
role in cell
  • cell death
  • proliferation
  • quantity
  • accumulation in
  • accumulation
  • invasion by
  • acidification
  • acidification in
  • pH
  • fusion

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • detergent resistant lipid raft fraction
  • synaptic vesicle membrane
  • intracellular membrane-bounded organelle
  • organelle
  • apical compartment
  • perinuclear region
  • cellular membrane
  • Plasma Membrane
  • vesicles
  • Golgi Apparatus
  • secretory granule membrane
  • cytosol
  • lysosome membrane
  • endosomal membrane
  • nuclear speckles
  • synaptic vesicles
  • early endosomes
  • brush border
  • cell membrane leading edge
  • clathrin-coated vesicles
  • phagosomes
  • cis Golgi cisternae

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the ATP6V0A1 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • endosomal lumen acidification
  • lysosomal lumen acidification
  • regulation of macroautophagy
  • vacuolar acidification

CELLULAR COMPONENT

Where in the cell the gene product is active
  • proton-transporting V-type ATPase complex
  • nuclear speck
  • Golgi apparatus
  • lysosomal membrane
  • plasma membrane
  • secretory granule membrane
  • vacuolar proton-transporting V-type ATPase, V0 domain
  • perinuclear region of cytoplasm
  • extracellular vesicular exosome
  • melanosome
  • intracellular membrane-bounded organelle
  • membrane
  • vacuolar proton-transporting V-type ATPase complex
  • phagocytic vesicle membrane
  • cytosol
  • endosome membrane
  • synaptic vesicle membrane
  • clathrin coated vesicle membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • proton-transporting ATPase activity, rotational mechanism
  • ATPase binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.