ATP6V0A4

ATP6V0A4 Gene Summary

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of intracellular compartments of eukaryotic cells. V-ATPase dependent acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c'', and d. This gene is one of four genes in man and mouse that encode different isoforms of the a subunit. Alternatively spliced transcript variants encoding the same protein have been described. Mutations in this gene are associated with renal tubular acidosis associated with preserved hearing. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ATP6V0A4
Official Name
ATPase H+ transporting V0 subunit a4 [Source:HGNC Symbol;Acc:HGNC:866]
Ensembl ID
ENSG00000105929
Bio databases IDs NCBI: 50617 Ensembl: ENSG00000105929
Aliases ATPase H+ transporting V0 subunit a4, V-ATPase subunit a4, vacuolar proton pump subunit 2
Synonyms
A4,ATP6N1B,ATP6N2,Atp6v0a4 predicted,ATPase, H+ transporting, lysosomal V0 subunit A4,ATPase H+ transporting V0 subunit a4,DRTA3,RDRTA2,RTA1C,RTADR,STV1,V-ATPase alpha4,VPH1,VPP2
Species
Human, Homo sapiens

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATPase binding
  • basic amino acid motif
  • H+-transporting two-sector ATPase
  • protein binding
  • H+-exporting ATPase
  • V-type ATPase 116kDa subunit family
  • transporter

Pathways

Biological processes and signaling networks where the ATP6V0A4 gene plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
  • ATP6V1B2
  • ATP6V1C1
  • NPC1
  • CUL9
  • ATP6V1F
  • ATP6AP2
  • ATP6V1D
  • FKBP5
  • ATP6V1E1
  • APOE
disease
  • autosomal recessive distal renal tubular acidosis
  • distal renal tubular acidosis type 3 with or without sensorineural hearing loss
  • renal clear cell adenocarcinoma
  • renal clear cell cancer
  • organismal death
  • distal renal tubular acidosis
  • hereditary disorder
  • distal renal tubular acidosis type 3 without sensorineural hearing loss
  • renal tubular acidosis
  • keratocystic odontogenic tumor
regulated by
  • tretinoin
  • TSC2
  • AGT
  • ionomycin
  • ATP6V0A4
  • POU5F1
  • TFEB
  • genistein
  • RARA
  • RARB
regulates
  • H+
  • ATP6V1E1
  • ATP6V0A4
  • ATP6V0A1
  • VMA21
  • ATP6V1B1
role in cell
  • migration
  • binding in
  • invasion by
  • ossification by
  • localization in
  • pH
  • acidification in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • synaptic vesicle membrane
  • apical compartment
  • cellular membrane
  • Plasma Membrane
  • endosomes
  • apical cell surfaces
  • basolateral cell surfaces
  • apical membrane
  • endosomal membrane
  • brush border
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the ATP6V0A4 gene, providing context for its role in the cell.

BIOLOGICAL PROCESS

Functions and activities the gene product is involved in
  • renal tubular secretion
  • sensory perception of sound
  • intracellular pH reduction
  • ossification
  • vacuolar acidification
  • regulation of pH

CELLULAR COMPONENT

Where in the cell the gene product is active
  • proton-transporting V-type ATPase complex
  • lysosomal membrane
  • plasma membrane
  • vacuolar proton-transporting V-type ATPase, V0 domain
  • endosome
  • brush border membrane
  • extracellular vesicular exosome
  • apical part of cell
  • vacuolar proton-transporting V-type ATPase complex
  • phagocytic vesicle membrane
  • endosome membrane
  • synaptic vesicle membrane
  • basolateral plasma membrane
  • apical plasma membrane

MOLECULAR FUNCTION

What the gene product does at the molecular level
  • protein binding
  • proton-transporting ATPase activity, rotational mechanism
  • ATPase binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.