ACTN1 Gene Summary [Human]

Alpha actinins belong to the spectrin gene superfamily which represents a diverse group of cytoskeletal proteins, including the alpha and beta spectrins and dystrophins. Alpha actinin is an actin-binding protein with multiple roles in different cell types. In nonmuscle cells, the cytoskeletal isoform is found along microfilament bundles and adherens-type junctions, where it is involved in binding actin to the membrane. In contrast, skeletal, cardiac, and smooth muscle isoforms are localized to the Z-disc and analogous dense bodies, where they help anchor the myofibrillar actin filaments. This gene encodes a nonmuscle, cytoskeletal, alpha actinin isoform and maps to the same site as the structurally similar erythroid beta spectrin gene. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ACTN1
Official Name
actinin alpha 1 [Source:HGNC Symbol;Acc:HGNC:163]
Ensembl ID
ENSG00000072110
Bio databases IDs NCBI: 87 Ensembl: ENSG00000072110
Aliases actinin alpha 1
Synonyms 3110023F10Rik, Actinin alpha 1, actinin, alpha 1, Actinin α 1, actinin, α 1, Actn1a, Alpha-Actinin, Alpha-Actinin1, Alpha-ACTN1, BDPLT15, α-Actinin, α-Actinin1, α-ACTN1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ACTN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • EF-Hand
  • transcription regulator
  • transcription co-activator
  • vinculin binding
  • Ca2+ insensitive EF hand
  • head domain
  • EFh_PI-PLC
  • EF-hand domain
  • EF hand
  • double-stranded RNA binding
  • ion channel binding
  • rod domain
  • SPEC
  • EF-hand, calcium binding motif
  • Calponin homology domain
  • actinin binding
  • EF-hand domain pair
  • EFh
  • protein domain specific binding
  • protein binding
  • cytoskeletal regulatory protein binding
  • actin filament binding
  • Spectrin repeats
  • actin-binding domain
  • integrin binding
  • protein homodimerization
  • Spectrin repeat
  • calponin homology (CH) domain superfamily
  • structural molecule

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • glioma formation
  • platelet-type bleeding disorder type 15
  • astrocytoma
  • migraines
  • organismal death
  • severe acute respiratory syndrome
  • hereditary disorder
  • post-traumatic stress disorder
  • Huntington disease
  • periodontitis
regulated by
regulates
role in cell
  • growth
  • formation
  • organization
  • size
  • migration
  • assembly
  • trafficking
  • macropinocytosis by
  • tubulation
  • fragmentation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • detergent resistant lipid raft fraction
  • glutaminergic synapse
  • cell junction
  • cortical cytoskeleton
  • ruffle
  • cortical actin cytoskeleton
  • cytoskeleton
  • Cytoplasm
  • cilia
  • cell borders
  • Extracellular Space
  • punctate structures
  • focal adhesions
  • actin cytoskeleton
  • Plasma Membrane
  • Mitochondria
  • actin filaments
  • intercellular junctions
  • desmosomes
  • cell-cell contacts
  • sarcomere
  • secretory granule membrane
  • cytosol
  • terminal web
  • lateral plasma membrane
  • perinuclear space
  • alpha granules
  • dendritic spines
  • synapse
  • sarcolemma
  • Z line
  • actin stress fibers
  • anchoring junction
  • tight junctions
  • zonula adherens
  • membrane rafts
  • brush border
  • cellular protrusions
  • pseudopodia
  • cell membrane leading edge
  • dendrites
  • dendritic shafts
  • exosomes
  • cell-cell adherens junctions
  • lamellipodia

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ACTN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of transcription, DNA-dependent
  • muscle cell development
  • platelet formation
  • actin filament network formation
  • actin filament organization
  • regulation of apoptotic process
  • focal adhesion assembly
  • actin cytoskeleton organization
  • platelet activation
  • platelet aggregation
  • actin filament bundle assembly

Cellular Component

Where in the cell the gene product is active
  • platelet alpha granule lumen
  • extracellular region
  • actin filament
  • cell projection
  • plasma membrane
  • Z disc
  • extracellular space
  • cell-cell junction
  • extracellular vesicular exosome
  • brush border
  • focal adhesion
  • cytoplasm
  • fascia adherens
  • stress fiber
  • ruffle
  • cell junction
  • cytosol
  • pseudopodium
  • cortical actin cytoskeleton

Molecular Function

What the gene product does at the molecular level
  • actin filament binding
  • protein homodimerization activity
  • protein binding
  • double-stranded RNA binding
  • calcium ion binding
  • ligand-dependent nuclear receptor transcription coactivator activity
  • vinculin binding
  • integrin binding
  • ion channel binding

Gene-Specific Assays for Results You Can Trust

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