COCH Gene Summary [Human]

The protein encoded by this gene is highly conserved in human, mouse, and chicken, showing 94% and 79% amino acid identity of human to mouse and chicken sequences, respectively. Hybridization to this gene was detected in spindle-shaped cells located along nerve fibers between the auditory ganglion and sensory epithelium. These cells accompany neurites at the habenula perforata, the opening through which neurites extend to innervate hair cells. This and the pattern of expression of this gene in chicken inner ear paralleled the histologic findings of acidophilic deposits, consistent with mucopolysaccharide ground substance, in temporal bones from DFNA9 (autosomal dominant nonsyndromic sensorineural deafness 9) patients. Mutations that cause DFNA9 have been reported in this gene. Alternative splicing results in multiple transcript variants encoding the same protein. Additional splice variants encoding distinct isoforms have been described but their biological validities have not been demonstrated. [provided by RefSeq, Oct 2008]

Details

Type
Protein Coding
Official Symbol
COCH
Official Name
cochlin [Source:HGNC Symbol;Acc:HGNC:2180]
Ensembl ID
ENSG00000100473
Bio databases IDs NCBI: 1690 Ensembl: ENSG00000100473
Aliases cochlin
Synonyms COCH-5B2, COCHLIN, D12H14S564E, DFNA9, DFNB110, Lulu
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COCH often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • von Willebrand factor (vWF) type A domain
  • vWFA
  • collagen binding
  • LCCL domain
  • protein binding
  • von Willebrand factor type A domain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • epithelial cancer
  • Alzheimer disease
  • hepatocellular carcinoma
  • Huntington disease
  • breast cancer
  • small cell lung cancer
  • plasma cell myeloma
  • familial nonsyndromic hearing impairment
  • glaucoma
  • lung squamous cell carcinoma
regulated by
role in cell
  • recruitment
  • expression in
  • differentiation
  • cytotoxic reaction
  • clearance
  • colonization by
  • cell survival
  • self-renewal

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • endoplasmic reticulum/Golgi apparatus fractions
  • Cytoplasm
  • cellular membrane
  • Nucleus
  • extracellular matrix
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COCH gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell shape
  • sensory perception of sound

Cellular Component

Where in the cell the gene product is active
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • collagen binding

Gene-Specific Assays for Results You Can Trust

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