ATP6V1D Gene Summary [Human]

This gene encodes a component of vacuolar ATPase (V-ATPase), a multisubunit enzyme that mediates acidification of eukaryotic intracellular organelles. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, receptor-mediated endocytosis, and synaptic vesicle proton gradient generation. V-ATPase is composed of a cytosolic V1 domain and a transmembrane V0 domain. The V1 domain consists of three A and three B subunits, two G subunits plus the C, D, E, F, and H subunits. The V1 domain contains the ATP catalytic site. The V0 domain consists of five different subunits: a, c, c', c", and d. Additional isoforms of many of the V1 and V0 subunit proteins are encoded by multiple genes or alternatively spliced transcript variants. This gene encodes the V1 domain D subunit protein. [provided by RefSeq, Jul 2008]

Details

Type
Nonsense Mediated Decay
Official Symbol
ATP6V1D
Official Name
ATPase H+ transporting V1 subunit D [Source:HGNC Symbol;Acc:HGNC:13527]
Ensembl ID
ENSG00000100554
Bio databases IDs NCBI: 51382 Ensembl: ENSG00000100554
Aliases ATPase H+ transporting V1 subunit D, V-ATPase subunit D
Synonyms 1110004P10Rik, ATP6M, ATPase, H+ transporting, lysosomal V1 subunit D, ATPase H+ transporting V1 subunit D, Vacuolar ATPase Subunit D, VATD, V-ATPase V1-D, VMA8
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ATP6V1D often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • ATP synthase subunit D
  • PRK00373
  • H+-transporting two-sector ATPase
  • protein binding
  • transporter

Pathways

Biological processes and signaling networks where the ATP6V1D gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • androgenic alopecia
regulated by
regulates
role in cell
  • Clathrin mediated endocytosis by
  • assembly
  • acidification in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • detergent resistant lipid raft fraction
  • cilia
  • cellular membrane
  • Plasma Membrane
  • centrosome
  • specific granule membrane
  • cytosol
  • nucleoplasm
  • clathrin-coated vesicles

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ATP6V1D gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cilium morphogenesis
  • intracellular pH reduction
  • endosomal lumen acidification
  • lysosomal lumen acidification
  • regulation of macroautophagy
  • vacuolar acidification

Cellular Component

Where in the cell the gene product is active
  • proton-transporting V-type ATPase complex
  • Golgi membrane
  • lysosomal membrane
  • plasma membrane
  • nucleoplasm
  • vacuolar proton-transporting V-type ATPase, V1 domain
  • centrosome
  • extracellular vesicular exosome
  • membrane
  • cilium
  • cytosol
  • endosome membrane
  • specific granule membrane
  • clathrin coated vesicle membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • proton-transporting ATPase activity, rotational mechanism

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.