NOD1 Gene Summary [Human]

This gene encodes a member of the nucleotide-binding oligomerization domain (NOD)-like receptor (NLR) family of proteins. The encoded protein plays a role in innate immunity by acting as a pattern-recognition receptor (PRR) that binds bacterial peptidoglycans and initiates inflammation. This protein has also been implicated in the immune response to viral and parasitic infection. Major structural features of this protein include an N-terminal caspase recruitment domain (CARD), a centrally located nucleotide-binding domain (NBD), and 10 tandem leucine-rich repeats (LRRs) in its C terminus. The CARD is involved in apoptotic signaling, LRRs participate in protein-protein interactions, and mutations in the NBD may affect the process of oligomerization and subsequent function of the LRR domain. Mutations in this gene are associated with asthma, inflammatory bowel disease, Behcet disease and sarcoidosis in human patients. [provided by RefSeq, Aug 2017]

Details

Type
Protein Coding
Official Symbol
NOD1
Official Name
nucleotide binding oligomerization domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16390]
Ensembl ID
ENSG00000106100
Bio databases IDs NCBI: 10392 Ensembl: ENSG00000106100
Aliases nucleotide binding oligomerization domain containing 1, nucleotide-binding oligomerization domain, leucine rich repeat and CARD domain containing 1, NLR family, CARD domain containing 1
Synonyms C230079P11, CARD4, CASPASE RECRUITMENT domain family 4, CLR7.1, F830007N14Rik, hNod1, mNod1, NLRC1, nucleotide-binding oligomerization domain containing 1, RGD1562269
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human NOD1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • CARD domain binding
  • NLRC4 helical domain HD2
  • NOD2 winged helix domain
  • protein phosphatase 1 regulatory subunit 42
  • signaling receptor activity
  • ubiquitin binding
  • caspase activator
  • protein binding
  • NACHT domain
  • identical protein binding
  • P-loop
  • nucleotide-binding domain
  • Caspase recruitment domain
  • leucine-rich repeat
  • binding protein
  • Leucine rich repeat, ribonuclease inhibitor type
  • protein homodimerization
  • peptidoglycan binding
  • Death Domain Superfamily of protein-protein interaction domains
  • P-loop containing Nucleoside Triphosphate Hydrolases

Pathways

Biological processes and signaling networks where the NOD1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • sepsis
  • metastasis
  • Crohn disease
  • pneumonia
  • neoplasia
  • refractive error
  • atherosclerosis
  • osteoarthritis
  • shock response
  • preeclampsia
regulated by
  • lipopolysaccharide
  • ADRB
  • dexamethasone
  • Immunoglobulin
  • progesterone
  • MEF2A
  • PIK3CG
  • peptidoglycan
  • ACAP1
  • KLF3
regulates
role in cell
  • phosphorylation in
  • expression in
  • production in
  • activation in
  • activation
  • quantity
  • phagocytosis by
  • migration
  • proliferation
  • cell viability

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • intracellular space
  • cellular membrane
  • cell cortex
  • Nucleus
  • Plasma Membrane
  • cytosol
  • apical cell surfaces
  • basolateral membrane
  • phagosomes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human NOD1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • detection of biotic stimulus
  • positive regulation of I-kappaB kinase/NF-kappaB cascade
  • JNK cascade
  • pattern recognition receptor signaling pathway
  • positive regulation of NF-kappaB transcription factor activity
  • positive regulation of macrophage cytokine production
  • inflammatory response
  • apoptotic process
  • positive regulation of tumor necrosis factor production
  • activation of cysteine-type endopeptidase activity involved in apoptotic process
  • nucleotide-binding oligomerization domain containing 1 signaling pathway
  • intracellular signal transduction
  • defense response to Gram-positive bacterium
  • stress-activated MAPK cascade
  • defense response to Gram-negative bacterium
  • signal transduction
  • defense response
  • defense response to bacterium
  • ERK1 and ERK2 cascade
  • positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
  • positive regulation of interleukin-8 production
  • positive regulation of JNK cascade
  • innate immune response
  • positive regulation of ERK1 and ERK2 cascade
  • positive regulation of apoptotic process
  • positive regulation of dendritic cell antigen processing and presentation
  • detection of bacterium
  • cellular response to muramyl dipeptide
  • positive regulation of interleukin-6 production
  • positive regulation of stress-activated MAPK cascade
  • positive regulation of interleukin-1 beta production
  • response to endoplasmic reticulum stress

Cellular Component

Where in the cell the gene product is active
  • cytoplasm
  • phagocytic vesicle
  • cytosol
  • basolateral plasma membrane
  • plasma membrane
  • apical plasma membrane

Molecular Function

What the gene product does at the molecular level
  • ATP binding
  • peptidoglycan binding
  • identical protein binding
  • protein binding
  • protein homodimerization activity
  • ubiquitin binding
  • CARD domain binding
  • cysteine-type endopeptidase activator activity involved in apoptotic process

Gene-Specific Assays for Results You Can Trust

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