NECTIN1 Gene Summary [Human]

This gene encodes an adhesion protein that plays a role in the organization of adherens junctions and tight junctions in epithelial and endothelial cells. The protein is a calcium(2+)-independent cell-cell adhesion molecule that belongs to the immunoglobulin superfamily and has 3 extracellular immunoglobulin-like loops, a single transmembrane domain (in some isoforms), and a cytoplasmic region. This protein acts as a receptor for glycoprotein D (gD) of herpes simplex viruses 1 and 2 (HSV-1, HSV-2), and pseudorabies virus (PRV) and mediates viral entry into epithelial and neuronal cells. Mutations in this gene cause cleft lip and palate/ectodermal dysplasia 1 syndrome (CLPED1) as well as non-syndromic cleft lip with or without cleft palate (CL/P). Alternative splicing results in multiple transcript variants encoding proteins with distinct C-termini. [provided by RefSeq, Oct 2009]

Details

Type
Processed Transcript
Official Symbol
NECTIN1
Official Name
nectin cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:9706]
Ensembl ID
ENSG00000110400
Bio databases IDs NCBI: 5818 Ensembl: ENSG00000110400
Aliases nectin cell adhesion molecule 1, nectin
Synonyms CD111, CLPED1, ED4, HIgR, HV1S, HVEC, MGC16207, Nectin1 δ, nectin cell adhesion molecule 1, OFC7, PRR, PRR1, PVRL1, PVRR, PVRR1, SK-12
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human NECTIN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • virion binding
  • soluble domain
  • signaling receptor activity
  • viral receptor
  • Immunoglobulin V-Type
  • immunoglobulin domain
  • cell adhesion molecule binding
  • TM_EGFR-like
  • protein binding
  • V domain
  • identical protein binding
  • Ig-like V domain
  • binding protein
  • cytoplasmic domain
  • Immunoglobulin like
  • transmembrane domain
  • protein homodimerization
  • carbohydrate binding
  • Immunoglobulin V-set domain
  • coreceptor

Pathways

Biological processes and signaling networks where the NECTIN1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • infection
  • endometriosis
  • Zlotogora-Ogur syndrome
  • rheumatoid arthritis
  • orofacial cleft 7
  • early missed abortion
  • eyelids open at birth
  • microphthalmia
  • encephalitis
  • disorder of pregnancy
regulated by
  • ibrutinib
  • TNF
  • beta-estradiol
  • NECTIN1
  • decitabine
  • N-[N-(3,5-difluorophenacetyl-L-Ala)]-S-phenylglycine t-butyl ester
  • FAS
  • tetradecanoylphorbol acetate
  • camptothecin
  • estradiol-17beta-benzoate
role in cell
  • formation
  • adhesion
  • morphology
  • guidance
  • abnormal morphology
  • cell-cell adhesion
  • entrance
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • endoplasmic reticulum/Golgi apparatus fractions
  • myelin enriched fraction
  • synaptic plasma membrane fractions
  • detergent-insoluble fractions
  • spot-like adhesion site
  • presynaptic regions
  • cell surface
  • Extracellular Space
  • cellular membrane
  • intercellular junctions
  • cell-cell contacts
  • microsome
  • presynaptic membrane
  • lateral plasma membrane
  • growth cone
  • synaptosomes
  • synapse
  • anchoring junction
  • junctional complexes
  • axons
  • dendrites
  • cell-cell adherens junctions

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human NECTIN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • viral entry into host cell
  • retina development in camera-type eye
  • heterophilic cell-cell adhesion
  • axon guidance
  • cell adhesion
  • homophilic cell adhesion
  • lens morphogenesis in camera-type eye
  • immune response
  • enamel mineralization
  • iron ion transport
  • desmosome organization
  • regulation of synapse assembly

Cellular Component

Where in the cell the gene product is active
  • dendrite
  • cell-cell contact zone
  • adherens junction
  • apical junction complex
  • membrane
  • growth cone membrane
  • presynaptic active zone membrane
  • extracellular region
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • virion binding
  • coreceptor activity
  • identical protein binding
  • protein homodimerization activity
  • protein binding
  • cell adhesion molecule binding
  • viral receptor activity
  • carbohydrate binding

Gene-Specific Assays for Results You Can Trust

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