RPS13 Gene Summary [Human]

Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. The protein belongs to the S15P family of ribosomal proteins. It is located in the cytoplasm. The protein has been shown to bind to the 5.8S rRNA in rat. The gene product of the E. coli ortholog (ribosomal protein S15) functions at early steps in ribosome assembly. This gene is co-transcribed with two U14 small nucleolar RNA genes, which are located in its third and fifth introns. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Jul 2008]

Details

Type
Retained Intron
Official Symbol
RPS13
Official Name
ribosomal protein S13 [Source:HGNC Symbol;Acc:HGNC:10386]
Ensembl ID
ENSG00000110700
Bio databases IDs NCBI: 6207 Ensembl: ENSG00000110700
Aliases ribosomal protein S13, 40S ribosomal protein S13
Synonyms 2700063M04Rik, ribosomal protein S13, S13, uS15
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human RPS13 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Ribosomal S13/S15 N-terminal domain
  • structural constituent of ribosome
  • mRNA 5' UTR binding
  • rRNA binding
  • Ribosomal protein S15
  • mRNA binding
  • S15_NS1_EPRS_RNA-bind
  • protein binding

Pathways

Biological processes and signaling networks where the RPS13 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • rheumatoid arthritis
  • flu
  • nonalcoholic fatty liver disease
  • lymphoma
  • lymphomagenesis
regulated by
  • sirolimus
  • 5-fluorouracil
  • regulatory T lymphocytes
  • MXD1
  • AGT
  • CAV1
  • beta-estradiol
  • acyline
  • Hbx
  • MYC
regulates
  • RNR
role in cell
  • cell death
  • processing in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • pre-ribosome
  • ribosome
  • Nucleus
  • cytosol
  • nucleoplasm
  • nucleoli
  • synapse
  • postsynaptic density

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human RPS13 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cytoplasmic translation
  • ribosomal small subunit biogenesis
  • negative regulation of RNA splicing
  • translation

Cellular Component

Where in the cell the gene product is active
  • postsynaptic density
  • small-subunit processome
  • cytosolic ribosome
  • cytosolic small ribosomal subunit
  • ribosome
  • nucleolus
  • nucleoplasm
  • nucleus
  • extracellular vesicular exosome
  • focal adhesion
  • cytoplasm
  • membrane
  • cytosol

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding
  • structural constituent of ribosome
  • mRNA 5'-UTR binding
  • mRNA binding
  • SSU rRNA binding

Gene-Specific Assays for Results You Can Trust

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